| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1676 |
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| Symbol | aqpZ |
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| ID | 6987293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1770234 |
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| End bp | 1770923 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380001 |
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| Product | aquaporin Z |
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| Protein accession | YP_002263101 |
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| Protein GI | 209695172 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAT ATATGGCAGA ATTTATAGGC ACGTTTTGGC TCGTGCTAGG TGGTTGTGGT
AGTGCAGTAT TGGCGGCTGG CTTTCCAGAG CTAGGTATTG GCTTTGTCGG TGTCGCACTT
GCGTTTGGTC TAACAGTATT AACGATGGCA TTTGCTATTG GACATATTTC TGGTTGCCAT
TTAAACCCTG CCGTTTCTAT AGGCCTTTGG GTTGGCGGAC GTTTTGATGC AAAAGATCTC
GTTCCTTACA TTATCTCACA AGTTTTAGGC GGGATTGCTG CGGGTGGTAT TTTATACTTA
ATCGCAAGTG GTCAAGCTGG CTTTGATTTA GCGGGTGGTT TTGCATCAAA TGGTTTTGGT
GAACATTCTC CTGGTGGCTA CACAATGATG TCAGCACTTA TCATCGAAGT TGTCTTAACT
GCGATGTTCC TAATTGTGAT TATGGGTGCG ACAGATAGCC GTGCTCCAGC AGGTTTTGCT
CCTATTGCGA TTGGTTTGTG TCTAACACTT ATTCACTTAA TCAGTATTCC TGTAACAAAC
ACTTCTGTTA ACCCTGCGCG TAGTACTGCT GTTGCAGTTT ATGTTGGTGA TTGGGCTACA
TCTCAACTTT GGTTGTTCTG GGTTGCTCCA ATTGTAGGTG CCATATTGGG TGCGTTAATC
TACAAAGTAA TCGCTAAAGA AGAAGCATAA
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| Protein sequence | MNKYMAEFIG TFWLVLGGCG SAVLAAGFPE LGIGFVGVAL AFGLTVLTMA FAIGHISGCH
LNPAVSIGLW VGGRFDAKDL VPYIISQVLG GIAAGGILYL IASGQAGFDL AGGFASNGFG
EHSPGGYTMM SALIIEVVLT AMFLIVIMGA TDSRAPAGFA PIAIGLCLTL IHLISIPVTN
TSVNPARSTA VAVYVGDWAT SQLWLFWVAP IVGAILGALI YKVIAKEEA
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