Gene VSAL_I1673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1673 
Symbol 
ID6987290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp1768022 
End bp1768630 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content42% 
IMG OID643379998 
ProductDNA repair protein 
Protein accessionYP_002263098 
Protein GI209695169 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.185829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAGC AGACAATAGA GCAGGGATTA AAAGCACTCT GTCTGATAGA TAAAGATCTT 
GAAGCCGCAG TAAAAACTCA AGGTTACCCA TCGCCAAGAG TGAACCCTCA TGGATTTGAG 
GCTTTTTTAT CTATTATCGT CAGCCAACAA CTGTCAACTA AAGTGGCGGC GGTGATAATG 
GGTCGTTTGG TTGCGTTATT AAAAGAGGTC ACTCCAGAAA GGCTCTTGAG CATTGAAGAG 
CAAAACCTTC GTGATGTTGG TTTATCTTGG CGTAAGATTG AATATGCAAA AGGGCTAGCC 
TTAGCCGTTC AATCGGGAAA CCTTGATATT GATGGCTTAG AGTCATTAAG TGATGAAGAT 
GCTATCAGTG CTATAACCAG TTTAAAGGGG TTTGGTCGTT GGAGTGCTGA GATTTATTTG 
ATGTTTTCAT TAGGACGACA AGATATTTTT CCCGCTGATG ATTTAGGGGT ATTGATAGCA 
TTAGGAAGAC TGAAAGGACT TACTGATAAA CCAACACCAA AACAAGCGAG AGAAATGGTA 
GGGCATTGGC AACCATGGAG AAGTGTCGGC TCGTTATTTC TTTGGCAGTA TTATCATCAA 
GATGCCTAA
 
Protein sequence
MDEQTIEQGL KALCLIDKDL EAAVKTQGYP SPRVNPHGFE AFLSIIVSQQ LSTKVAAVIM 
GRLVALLKEV TPERLLSIEE QNLRDVGLSW RKIEYAKGLA LAVQSGNLDI DGLESLSDED 
AISAITSLKG FGRWSAEIYL MFSLGRQDIF PADDLGVLIA LGRLKGLTDK PTPKQAREMV 
GHWQPWRSVG SLFLWQYYHQ DA