| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1660 |
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| Symbol | chbA |
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| ID | 6987280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1758057 |
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| End bp | 1758377 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379986 |
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| Product | PTS system, lactose/cellobiose specific IIA subunit |
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| Protein accession | YP_002263086 |
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| Protein GI | 209695157 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1447] Phosphotransferase system cellobiose-specific component IIA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0349238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAGTG AAGAGTACGA AGAAAAAGTA ATGATGCTGC TTGTTAATGC GGGATCTGCT
CGTAGCCAAT TAATGGAAGC AATGAGAGCC GCTCGTCAGA AGAATTTTGA ACTTTCTGAT
AAGCATATTG AAGGTGCGCA AGCGGCATTA AAAGAAGCAC ACTCAATTCA AACTAGACTT
ATTGAATTTG ATGAAGGAGA AGGAAAACTT CCCGTTCATA TTGTGATGGT TCACGCTCAA
GATCACCTTA TGAACGCCGT TTTATTAATG GATATGGCCA CAGAAATTAT CTATTTGCAT
AAAGAACGAA TGATTTCATA A
|
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| Protein sequence | MDSEEYEEKV MMLLVNAGSA RSQLMEAMRA ARQKNFELSD KHIEGAQAAL KEAHSIQTRL
IEFDEGEGKL PVHIVMVHAQ DHLMNAVLLM DMATEIIYLH KERMIS
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