Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1642 |
Symbol | |
ID | 6987262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1744838 |
End bp | 1745956 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643379970 |
Product | hypothetical protein, putative phage gene |
Protein accession | YP_002263070 |
Protein GI | 209695141 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.120198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGATT TGTTTTTTAT TCCAACTGGT GATTATTTAA GACAGTTTAT TGGCAATCCA ATGATTAAAG CTGCTGATAT CCGTGAAATT TTAAAAAGAA GAGGTAATTT CTCTTCTTCA AACGATAAGA AAGTTTTGGG GCCTCTTTTG GTTAAAACAG GTGTTTCTCC TGAAGAATTT GAGACACTTA AAGAGTCCAT ACAAACAAAA GAAGAAAACC CTAAAGTTCA AACACGGAAA TTACAATGGA ATAGTGAGGA AACATTAGTT GATGCAATTC CTCATGACTT TGATTTTTCT GATTTAATTG ATGATCCTTT TGGTATATCG TCAATTGATA ATGATCCTAC ATTCTCATTA GCTGGTGAAG GTAAAGATCC TAATCATTTA ATTGCTGAAA TTGTAATTAA ACGAAATGAT AAAACTAAAA ATTTTGGTGA TGATATTACT TATCATCATT GTTCAATCGA AATGAAACTT GATGAATATA ATAATATTGA CTTAAACCTA ACAGTTAAGC ATTCATCAAA GGAAAGTTTA AATGTTATTA ATAAAGTGTC TCGACGAGTT CATAAGCATT TAAAAGAAAA TAACTATGTA TCAGAAGAGG CGATGCAACA AATACTTTTT GGTGATTTTA CCAATGAAAA TAGAATAAAT TTCCTTATTG AATTGGCTAA ATCAAAAGAG ATGTATTTGT ATTATAAGGA TATTAAAAAA GTCTATTTTT CTCCAGATGA AAATGTAAAA GGTAATAAGC CACCAGAAAT TGAGTGGTTT GAAAAGAAAA TTAAAGACTT AATGTTTAAA GGTGAAAATT TAGATTCAAG TATGTATTTA TTTAAGCCTG AATTAAAAAA ACATCTTAAA CTATATAGTG TTAGCTCTAG TCATGAGTTA AATGATGATA AACATCAAGG TACTTGTGTT ATCAATCTGT ACTTCCAAGA TATGGAAAGT AATAGTGAAT TAATGATGGA AGTTGATAAT CTAAAAATAC AACAGAAATT AGCTAATGAG AATAAATCAA AAATTAAACT TCAAATACTT AAATTCTTGG AGTCTAAGAA ATTAGAGCTA TATAATAAAT ATTCATATAA ATCACAACCG CACGCATAA
|
Protein sequence | MSDLFFIPTG DYLRQFIGNP MIKAADIREI LKRRGNFSSS NDKKVLGPLL VKTGVSPEEF ETLKESIQTK EENPKVQTRK LQWNSEETLV DAIPHDFDFS DLIDDPFGIS SIDNDPTFSL AGEGKDPNHL IAEIVIKRND KTKNFGDDIT YHHCSIEMKL DEYNNIDLNL TVKHSSKESL NVINKVSRRV HKHLKENNYV SEEAMQQILF GDFTNENRIN FLIELAKSKE MYLYYKDIKK VYFSPDENVK GNKPPEIEWF EKKIKDLMFK GENLDSSMYL FKPELKKHLK LYSVSSSHEL NDDKHQGTCV INLYFQDMES NSELMMEVDN LKIQQKLANE NKSKIKLQIL KFLESKKLEL YNKYSYKSQP HA
|
| |