Gene VSAL_I1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1642 
Symbol 
ID6987262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1744838 
End bp1745956 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content28% 
IMG OID643379970 
Producthypothetical protein, putative phage gene 
Protein accessionYP_002263070 
Protein GI209695141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.120198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATT TGTTTTTTAT TCCAACTGGT GATTATTTAA GACAGTTTAT TGGCAATCCA 
ATGATTAAAG CTGCTGATAT CCGTGAAATT TTAAAAAGAA GAGGTAATTT CTCTTCTTCA
AACGATAAGA AAGTTTTGGG GCCTCTTTTG GTTAAAACAG GTGTTTCTCC TGAAGAATTT
GAGACACTTA AAGAGTCCAT ACAAACAAAA GAAGAAAACC CTAAAGTTCA AACACGGAAA
TTACAATGGA ATAGTGAGGA AACATTAGTT GATGCAATTC CTCATGACTT TGATTTTTCT
GATTTAATTG ATGATCCTTT TGGTATATCG TCAATTGATA ATGATCCTAC ATTCTCATTA
GCTGGTGAAG GTAAAGATCC TAATCATTTA ATTGCTGAAA TTGTAATTAA ACGAAATGAT
AAAACTAAAA ATTTTGGTGA TGATATTACT TATCATCATT GTTCAATCGA AATGAAACTT
GATGAATATA ATAATATTGA CTTAAACCTA ACAGTTAAGC ATTCATCAAA GGAAAGTTTA
AATGTTATTA ATAAAGTGTC TCGACGAGTT CATAAGCATT TAAAAGAAAA TAACTATGTA
TCAGAAGAGG CGATGCAACA AATACTTTTT GGTGATTTTA CCAATGAAAA TAGAATAAAT
TTCCTTATTG AATTGGCTAA ATCAAAAGAG ATGTATTTGT ATTATAAGGA TATTAAAAAA
GTCTATTTTT CTCCAGATGA AAATGTAAAA GGTAATAAGC CACCAGAAAT TGAGTGGTTT
GAAAAGAAAA TTAAAGACTT AATGTTTAAA GGTGAAAATT TAGATTCAAG TATGTATTTA
TTTAAGCCTG AATTAAAAAA ACATCTTAAA CTATATAGTG TTAGCTCTAG TCATGAGTTA
AATGATGATA AACATCAAGG TACTTGTGTT ATCAATCTGT ACTTCCAAGA TATGGAAAGT
AATAGTGAAT TAATGATGGA AGTTGATAAT CTAAAAATAC AACAGAAATT AGCTAATGAG
AATAAATCAA AAATTAAACT TCAAATACTT AAATTCTTGG AGTCTAAGAA ATTAGAGCTA
TATAATAAAT ATTCATATAA ATCACAACCG CACGCATAA
 
Protein sequence
MSDLFFIPTG DYLRQFIGNP MIKAADIREI LKRRGNFSSS NDKKVLGPLL VKTGVSPEEF 
ETLKESIQTK EENPKVQTRK LQWNSEETLV DAIPHDFDFS DLIDDPFGIS SIDNDPTFSL
AGEGKDPNHL IAEIVIKRND KTKNFGDDIT YHHCSIEMKL DEYNNIDLNL TVKHSSKESL
NVINKVSRRV HKHLKENNYV SEEAMQQILF GDFTNENRIN FLIELAKSKE MYLYYKDIKK
VYFSPDENVK GNKPPEIEWF EKKIKDLMFK GENLDSSMYL FKPELKKHLK LYSVSSSHEL
NDDKHQGTCV INLYFQDMES NSELMMEVDN LKIQQKLANE NKSKIKLQIL KFLESKKLEL
YNKYSYKSQP HA