Gene VSAL_I1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1622 
Symbol 
ID6987243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1728578 
End bp1728988 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content36% 
IMG OID643379952 
Productputative cell wall lytic enzyme 
Protein accessionYP_002263052 
Protein GI209695123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0519203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATA AAAAAAATAT CATTCTAGCA GCATCGCTAA TGTCTGCATT AGTTCTTACG 
GGCTGTGCAT CAAATGATGA ACTTATTGCT CAGCAAAAAA ATCAGACCGA CCAGATTAGC
GCCTTAGAAT CAAAAGTAAG CTCATTAGAA AGTGAATTAC AAAAGCAACA AAGCGAAGGA
AAGGAAATAT CCCAAACTGT TCGTCAGTTA AGTGTGAAAC AAGATGAGCT AAATGCACAA
GCTCAACAGC AGGCTGATGA AGCCGTTATG TATTACACAC TTAAGCAAGA TGATACGTTA
TATAGCATCG CGAAAGACCA AGGGATCGCA TTAGACGATT TACTTCAATT AAATCCTCAA
ATCAAAAATC CTAAGCGTCT TCTTATTGGT GATGTAATTA ATATTAAATA G
 
Protein sequence
MKHKKNIILA ASLMSALVLT GCASNDELIA QQKNQTDQIS ALESKVSSLE SELQKQQSEG 
KEISQTVRQL SVKQDELNAQ AQQQADEAVM YYTLKQDDTL YSIAKDQGIA LDDLLQLNPQ
IKNPKRLLIG DVINIK