Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1622 |
Symbol | |
ID | 6987243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1728578 |
End bp | 1728988 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643379952 |
Product | putative cell wall lytic enzyme |
Protein accession | YP_002263052 |
Protein GI | 209695123 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0519203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATA AAAAAAATAT CATTCTAGCA GCATCGCTAA TGTCTGCATT AGTTCTTACG GGCTGTGCAT CAAATGATGA ACTTATTGCT CAGCAAAAAA ATCAGACCGA CCAGATTAGC GCCTTAGAAT CAAAAGTAAG CTCATTAGAA AGTGAATTAC AAAAGCAACA AAGCGAAGGA AAGGAAATAT CCCAAACTGT TCGTCAGTTA AGTGTGAAAC AAGATGAGCT AAATGCACAA GCTCAACAGC AGGCTGATGA AGCCGTTATG TATTACACAC TTAAGCAAGA TGATACGTTA TATAGCATCG CGAAAGACCA AGGGATCGCA TTAGACGATT TACTTCAATT AAATCCTCAA ATCAAAAATC CTAAGCGTCT TCTTATTGGT GATGTAATTA ATATTAAATA G
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Protein sequence | MKHKKNIILA ASLMSALVLT GCASNDELIA QQKNQTDQIS ALESKVSSLE SELQKQQSEG KEISQTVRQL SVKQDELNAQ AQQQADEAVM YYTLKQDDTL YSIAKDQGIA LDDLLQLNPQ IKNPKRLLIG DVINIK
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