| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1618 |
|---|
| Symbol | malI |
|---|
| ID | 6987240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 1725340 |
|---|
| End bp | 1726362 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643379948 |
|---|
| Product | DNA-binding transcriptional repressor MalI |
|---|
| Protein accession | YP_002263048 |
|---|
| Protein GI | 209695119 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.671811 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAACA AAAAAGCAAA TATAAAGGAT GTTGCAAAAC GAGCGGGAGT CTCAGTAACA
ACCGTATCAA TGGCACTGAG TGATAAAGGA CGGATCTCAC CTGAAACCAT TCAAAAAGTA
AATCAAGCGG TACAAGAACT CGGCTACATT AAAAATCGCA CCGCTTCTAA TTTAAGTTCA
AAACAATCAT TATTGATTGG CTTAATTTTA AGAGACATCA GCGACCCCTA TTACGCTGAA
ATAGCAGCAG GATTAAGTGA AGTCTTAGAA GATAAGGGAT ACATGCTTTT TCTTACCCAA
TCAGGCACAA ATCAAGATAA GTTTGATCAA TGTATTGAAA CCATGGTGGC TCAAAATGTT
GGTGGGATTG TATTTTGCCC TATCCGTGAT ATTGGCGTTC CGAATATTCA AAAAATACAA
GATTTAAACT TACCAATAGT CTGTGTTGCT CGAGCCAAAG TAGGGCAGCA GATTGACTTT
GTTGGGCCCG ATAATATGCA AGCTGCGAAA ATTGCTACAG AGTATTTGAT TAAACAAGGG
CACCGTCAAA TAGCTTACGT TGGCGGACAA AGTGATTCAT TAAGTAGAGC CGAACGTTTA
GGTGGTTATT GCAGCACACT AATGCAATTT GGCTTACCTT TTAAACCTGA ATGGGTTGTT
GAATGTGATA AAAGTCAAAC TGCCGCCGCA GAAGCAGTAA ATCAACTAAT TAATAAAAAT
CCAAAAATAA CAGCAATACT ATGTCATTAT TCATCAACCG CATTTGGTGC TGTTTATGGT
GTTAATCGCT CTAATCGCAC AGTGGGTAAA GATAATTACA TTGGACAACA AGTCGCTATT
ATTGGATTTG ATGATGTCCC TGAAGCCGAG TTAATTCAAC CTTCATTAAC CTTTGTCTCC
TCCCCTATTC GTGACATTGG TCGCCAAGCT GGCCACCGAT TAATTCACCA AATAAACAAT
AAAGACAGTG CACCTCAAAG TCTTATTTTA AATCCAGAAT TAATTGCTCG TGACTCAGCT
TAG
|
|---|
| Protein sequence | MTNKKANIKD VAKRAGVSVT TVSMALSDKG RISPETIQKV NQAVQELGYI KNRTASNLSS
KQSLLIGLIL RDISDPYYAE IAAGLSEVLE DKGYMLFLTQ SGTNQDKFDQ CIETMVAQNV
GGIVFCPIRD IGVPNIQKIQ DLNLPIVCVA RAKVGQQIDF VGPDNMQAAK IATEYLIKQG
HRQIAYVGGQ SDSLSRAERL GGYCSTLMQF GLPFKPEWVV ECDKSQTAAA EAVNQLINKN
PKITAILCHY SSTAFGAVYG VNRSNRTVGK DNYIGQQVAI IGFDDVPEAE LIQPSLTFVS
SPIRDIGRQA GHRLIHQINN KDSAPQSLIL NPELIARDSA
|
|---|
| |