| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1608 |
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| Symbol | galR |
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| ID | 6987234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1714289 |
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| End bp | 1715311 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643379938 |
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| Product | HTH-type transcriptional regulator GalR |
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| Protein accession | YP_002263038 |
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| Protein GI | 209695109 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.656083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCA TTAATGATGT AGCAAAGCTA GCTGGTGTAT CCACTGCCAC CGTATCTCGT
GTCATCAACA ACTCAGCTTA TGTTGAGCCT GTGACTCTTG AACGAGTACA AACCGCTGTC
CGAGAACTGA ACTATCAACG AGACGCCAGA GCAAGTGCAT TAGCAAGAAA AACAAATAAT
ACGCTTGGGT TATTAACGGG TAATCTCGCC GATCCTTTTT TTGCTCTTAT CGCTAAACAT
GTAGAGGAGG TAGCACGTAA AAACAAGTGC CAGCTAGTCG TGGTTAGTGG CGGTCATGAT
GCTCAAAGAG AAAAAGAAGG ATTAGATTTT TTAATCAGCC AAGGATGTGA AGCCATGGTG
GTTCACGCCA AAATGTTAGA TGACGCCACC CTACTTAGAT ACAGTGCCCA ATTGCCTTCG
ATGGTATTGC TTAATCGCAC CATTCCGCAA ATATCAAACC GCTCTGTCTA TATTGATAAT
AGAGCCGGTG CTAAAAAATC CGTCATTCAT TTAATTGAAC AAGGTCACCG TAAGATCGCC
TGTGTCACCA GTGATCTCCC TATTGAAGAC AGAACAGAGC GACTTAACGG TTATCGTGAT
GCGATGAAAG AAGCTAATAT CACCATTGAG CCTAACTGGG TAATAAATCA GAACTTTAGT
GAACAAGGCG GAGAGCTTGC GGGCGAACAA TTATTATCTC AATGCCCAGA AGTATCAGCC
GTTGTCACCT TTAATGATGT GATGGCCGCA GGATTAATGG CAAACCTGCA TGAAAACAAT
ATCAACGTAC CTAACGATAT TTCTATTGTC GGGTTTGACG ATGTATTACT TGCTCGATAC
CTCTATCCGC GCTTAACCAC CATGCACAAT CCAATAGATG AAATGTCGAG CTATGCTGCT
GATTTAGCAT TAAAAATCAA AAACACAGGA TACATCCCCC CATCAAATCA TCGCTTTCAT
GCGACCTTGG TTGAGCGACA AACAGTCATA CAATATTCAG ATAAACAAGC AGTAAAAGTG
TGA
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| Protein sequence | MATINDVAKL AGVSTATVSR VINNSAYVEP VTLERVQTAV RELNYQRDAR ASALARKTNN
TLGLLTGNLA DPFFALIAKH VEEVARKNKC QLVVVSGGHD AQREKEGLDF LISQGCEAMV
VHAKMLDDAT LLRYSAQLPS MVLLNRTIPQ ISNRSVYIDN RAGAKKSVIH LIEQGHRKIA
CVTSDLPIED RTERLNGYRD AMKEANITIE PNWVINQNFS EQGGELAGEQ LLSQCPEVSA
VVTFNDVMAA GLMANLHENN INVPNDISIV GFDDVLLARY LYPRLTTMHN PIDEMSSYAA
DLALKIKNTG YIPPSNHRFH ATLVERQTVI QYSDKQAVKV
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