| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1607 |
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| Symbol | |
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| ID | 6987233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1713042 |
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| End bp | 1714034 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643379937 |
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| Product | 3',5'-cyclic-nucleotide phosphodiesterase |
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| Protein accession | YP_002263037 |
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| Protein GI | 209695108 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5212] Low-affinity cAMP phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.964421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA GTAAATTAGT CGTGTTCTTT ACGTGTTTGT CTGTGCTGTC TTTTACGGTT
CAATCAAGCA GCTTTGATAC CGTTACTCTA GGCAGTAAGG GAGGGATTCA AGATGGCAAT
TTAACGGCTT TTTTAATTAA GAGCGATCAA GATTCTAATT TTGTCATGCT TGATGCCGGC
TCTGTAGTGA ATGGATTGAT TGTAGCAGAG CAAAAAGGCG CGTTTAAAAA TATTGATTTA
CCTGATGATT CGCCTTACAG CAAAGTAGGT TACCTTTTAA ATGATAAGAT TAAGGGATAC
TTGATCAGTC ATGGGCATTT AGACCATGTT GCGGGGTTAA TTATATCTTC CCCTGATGAC
AGTAAAAAAC CTATTTATGG ATTAGAAGCG ACCAATCGTG ATCTGATGAA TAACTACTTT
AATTGGTCTG CATGGCCAAA CTTTGGCAAT AAAGGCAGTG GTTTTAAGAT TAACAAATAC
AATTACGTCG ATCTGGTACC AACGACATGG AATGCGATTT CAGATACAAC AATGAGCATA
ATGGCATTAC CACTTTCTCA TTCTGGTGGA GAATCGACGG CATTTATTTT AAAAGATCAA
AAAGGGGATG TATTTGCCTA TTTTGGTGAT ACTGGCCCCG ATGACGTTGA AAAAAGCTCA
GCATTAAAAA CCGTGTGGAC AACATTGGCT CCTTTTGTAG AACAAGGTAA ATTGAAAGGC
ATTATTATTG AAGTTTCTTT TACCAATAAA ACGCCTGACA AGTCCTTATT CGGACATTTA
ACACCAAATT GGTTAATTAA AGAACTGACG GTGTTAGAAA ACATGAATGG AAAAGGCTCG
TTAAAAGGGC TAGATGTCGT GATAAGCCAC ATTAAGTACA GCTTAAAAAA CAGTGAAGAT
CCAAAAGTTA TTATTCAGAA GCAATTAGCC GATGCGAACG ATCTTGGTGT GAATTTTATC
TTTCCAGAGC AAGGGGATTC ACTGACGTTT TAA
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| Protein sequence | MFKSKLVVFF TCLSVLSFTV QSSSFDTVTL GSKGGIQDGN LTAFLIKSDQ DSNFVMLDAG
SVVNGLIVAE QKGAFKNIDL PDDSPYSKVG YLLNDKIKGY LISHGHLDHV AGLIISSPDD
SKKPIYGLEA TNRDLMNNYF NWSAWPNFGN KGSGFKINKY NYVDLVPTTW NAISDTTMSI
MALPLSHSGG ESTAFILKDQ KGDVFAYFGD TGPDDVEKSS ALKTVWTTLA PFVEQGKLKG
IIIEVSFTNK TPDKSLFGHL TPNWLIKELT VLENMNGKGS LKGLDVVISH IKYSLKNSED
PKVIIQKQLA DANDLGVNFI FPEQGDSLTF
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