| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1586 |
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| Symbol | |
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| ID | 6988905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1696300 |
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| End bp | 1697211 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379918 |
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| Product | HTH-type transcriptional regulator, LysR family |
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| Protein accession | YP_002263018 |
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| Protein GI | 209695089 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.274123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAGC AAGCCAAACA AATGATTGTG TTCAACGCAC TACATCAACA ACAAAGCTTT
ACTAAAGCTG CTCAACTTCT CGAAATATCT AGAACTCAGG TAAGTAAACA GATCCAGTTG
CTTGAAGAAC GCTTAGGAGT TCAATTAGTG CAACGAACCA CTCGTTCTTT TTCTCTTACC
GAAGCGGGTC AATCTTTTGC CGTCCATTGC GCGAATATTG CCGATGAAAT CAATGAAGCA
GAAAATGAAC TGCTTTCTAA TGTAGACAAT CTACAAGGAA AACTACGAGT CGGTATTGCT
CAGTCATTCG CAACCAATCA TATTTTGCCT TATCTGTCAG AGCTTCATCA GCGCTACCCT
TTATTGAATG TTGAAATTAC CTTGTTTGAT CATAAAATTG ATGTCATCGC AGAGCAATTA
GACTTATGGA TAGGAGTCAT GGACTCTCCT CCTGAAGGAT TTGTTGCTCG TCACTTAATT
GATTGTCATT TTGTTTTAGT TGCTAGCCCT TCTTACCTTT CGATACAAGG GATCCCTTAT
CATCCTTATG ATTTAAAAAA GCATAATTGT TTAACTTATG TGAGCCGAGA ACGTAAAGAC
AATGTATGGG GGTTTCATAA AGATAACGAT AATCTACAAA TTAAAGTCTC AGGGAATTAT
CGCATTGATT CAGCTGATGC GATTCGGAAT GCAACAATTG CAGGAAGTGG AATTGGTTAC
GTTGCAACGT ATTTACTGTC TGATGAATTG CGTACCGGTA AGCTGATCCA ACTCTTACCC
GATTGGGAAT TAAATCAGTC GATGCCGTTA TATGCCGTTT ACCCTCGTCG TAAATTCTTA
CCTAAAAAAG TCCATGTTTT TATGGAATTT GTTCGTCAGC ATATTAATTC AGAGAAAATT
GATAATATAT AA
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| Protein sequence | MLKQAKQMIV FNALHQQQSF TKAAQLLEIS RTQVSKQIQL LEERLGVQLV QRTTRSFSLT
EAGQSFAVHC ANIADEINEA ENELLSNVDN LQGKLRVGIA QSFATNHILP YLSELHQRYP
LLNVEITLFD HKIDVIAEQL DLWIGVMDSP PEGFVARHLI DCHFVLVASP SYLSIQGIPY
HPYDLKKHNC LTYVSRERKD NVWGFHKDND NLQIKVSGNY RIDSADAIRN ATIAGSGIGY
VATYLLSDEL RTGKLIQLLP DWELNQSMPL YAVYPRRKFL PKKVHVFMEF VRQHINSEKI
DNI
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