| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1580 |
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| Symbol | potA |
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| ID | 6987213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1690197 |
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| End bp | 1691315 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379912 |
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| Product | putrescine/spermidine ABC transporter ATPase protein |
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| Protein accession | YP_002263012 |
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| Protein GI | 209695083 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.203005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAACGTTA CACTACAATC CGAAAAAAAT GCGGTTATTA AATTAACGGG CATTTCAAAA
AGCTTTGATG GAAAAGAAGT TATATCTAAA TTTGATTTAG ACGTAAATCA CGGTGAATTT
TTAACGATTC TAGGCCCATC AGGTTGTGGT AAAACCACAG TGTTACGCAT GATTGCAGGT
TTTGAAACCG CAGATGCAGG AACAATTTTA CTGGATTCGA AAGATGTAAC GTCTATCCCC
GCAGAACAGA GGCATGTGAA TACTGTATTC CAAAGCTACG CCCTATTCCC ACACATGACG
GTATTTGACA ACGTTGCGTT TGGTTTACGT ATGCAAAATG TGCCAAACAA AGACATCGAA
TCACGCGTAA TGGAAGCATT ACAAATGGTG CGTCTAGCAC AAATGGCAAA TCGTAAACCG
CACCAGTTAT CAGGTGGTCA ACAACAACGT ATCGCGATTG CACGTGCTGT TGTGAATAAG
CCAAAGGTTC TATTGTTAGA TGAATCTTTA TCTGCCCTTG ATTACAAATT GCGTAAGCAA
ATGCAGATTG AGCTAAAACA ACTACAACGT CAATTGGGTA TTACTTTTAT TTTTGTAACT
CACGATCAAG AAGAAGCCCT TTCTATGTCA GATCGCATCA TTGTTATGCG TGACGGTGTT
ATCGAACAGG ACGGCACTCC TCGTGAAATT TACGAAGAAC CTAAGAACTT ATTCGTTGCT
CGCTTCATCG GTGAAATCAA TGTGTTCGCC GCTACGGTGC TAGAACGCCT AGATGACAAG
CGAATCAGAG CCGAAATCGA AGACACGTCA GCAGTCGTTT ATTGTGATCT GGATGTCAAC
CCAGGCGATA AAGTAAAAGT GCTACTGCGC CCTGAAGATT TGCGACTGGA AGAAATTAAA
GAATCAGACA CCAAAGGCAT CACCGGTTAC GTTCGTGAAC GTACCTACAA AGGGATGACA
TTGGACTCTG TTCTTGAATT AGATTCAGGC ATGCGTGTCA TGATCAGTGA ATTCTTTAAT
GAAGATGACC CAGATGTTGA TCACTCTTTA GGTCAAAAAG TAGCAATTAC TTGGGTTGAA
AGTTGGGAAG TGGTGCTCGC AGATGAACAA GAAGTTTAA
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| Protein sequence | MNVTLQSEKN AVIKLTGISK SFDGKEVISK FDLDVNHGEF LTILGPSGCG KTTVLRMIAG
FETADAGTIL LDSKDVTSIP AEQRHVNTVF QSYALFPHMT VFDNVAFGLR MQNVPNKDIE
SRVMEALQMV RLAQMANRKP HQLSGGQQQR IAIARAVVNK PKVLLLDESL SALDYKLRKQ
MQIELKQLQR QLGITFIFVT HDQEEALSMS DRIIVMRDGV IEQDGTPREI YEEPKNLFVA
RFIGEINVFA ATVLERLDDK RIRAEIEDTS AVVYCDLDVN PGDKVKVLLR PEDLRLEEIK
ESDTKGITGY VRERTYKGMT LDSVLELDSG MRVMISEFFN EDDPDVDHSL GQKVAITWVE
SWEVVLADEQ EV
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