Gene VSAL_I1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1570 
Symbol 
ID6987205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp1681553 
End bp1682227 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content39% 
IMG OID643379902 
Productmembrane protein 
Protein accessionYP_002263002 
Protein GI209695073 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.403322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGTG ATTTTATTGG TGCGTTTATT ATTGGTTTAA TGGGCGCAGG ACACTGCATT 
GGTATGTGCG GAGGAATATC GGCTGTAATA TCAATGGGTT CAGATGGTAA TAAATACCCT 
AGATGGTGCT TTATCTTATT ATATAACCTT GGAAGAATAA GTTCTTATGG TATTTTCGGG 
TTTATTGTTG GTGGGATATT TGTATCTATT GCACAAACAA GCTCAAGTTA TAGTGCGCTA 
GTTTACTTGC GGGTGTTTGC TGGCATAATG ATGTGTCTGT TAGCGCTATA CATCGCTAAT 
TGGTGGAAAG GCATTGTTTA CATTGAAGTA ATAGGGAAAA AATTATGGCA ATTTATCTCC 
CCTTTAACAA AACCATTATT ACCTTTAAAA TCCCCTTTCC ATGCTATTCC ATTTGGATTT 
TTATGGGGGT GGTTACCTTG TGGATTAGTC TATTCAACAC TCACTTGGGC CGCGGTTTCA 
GGAAGTGCTC TCAATGGCGC ATTGGTTATG ATGGCATTTG GTTTAGGTAC CTTACCTGCC 
ATGTTTCTTG TTGGTATTGG TGCTCAAACC CTAAAAACAT GGCTAAATCA TAAACTAACC 
CGAAACGTAG GGGGTTTATT GCTTTTAGCT TATGGACTTC AAACGATATA TGTTGCGCTA 
GATCAACTCC GCTAA
 
Protein sequence
MNSDFIGAFI IGLMGAGHCI GMCGGISAVI SMGSDGNKYP RWCFILLYNL GRISSYGIFG 
FIVGGIFVSI AQTSSSYSAL VYLRVFAGIM MCLLALYIAN WWKGIVYIEV IGKKLWQFIS 
PLTKPLLPLK SPFHAIPFGF LWGWLPCGLV YSTLTWAAVS GSALNGALVM MAFGLGTLPA 
MFLVGIGAQT LKTWLNHKLT RNVGGLLLLA YGLQTIYVAL DQLR