| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1568 |
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| Symbol | |
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| ID | 6987203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1679025 |
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| End bp | 1681400 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379900 |
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| Product | putative cation-transporting ATPase |
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| Protein accession | YP_002263000 |
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| Protein GI | 209695071 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.758768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAGG ATTGTTACCA TTGCAATGAG CCTGTTCCTA TAGGCTCTTC TTTTCAAGTT
GATATATTAG GTCAAAAGCG AGATATGTGT TGCCTAGGCT GTGAATCAGT AGCGCAAACA
ATCATCGATA ATGGCTTATC TTCTTATTAT CAATATCGTA CTGCACCGGC AGATAAAGCC
AATTTAGTCC CAGATCAATT AAAAGCACTT GAGCATTATG ATCACAAAGA AATTCAAAAA
GAATTCGTAA GAACAACTGA AAACAACAAG GAAGTGACAC TGTCACTTGA TGGTGTATCT
TGCGCCGCTT GTGCTTGGTT GATTGAAAAA CAATTAGCGA AAGCAAAAGG AATTCATCAA
ATAACCGTTA ATACGTCAAC TCATCGAGCA TTATTAAGTT GGGATCCGAA AGAAACAGAA
TTAAGCACAC TATTAACGTT AATCCACCAA TTGGGTTATA AGGCGGCGCC ATTTGAAGCC
GATAAACAAG AAGAAGAATA CCATCGCTCA ATGAAACAAT ACCTGTATCG TTTAGGTATT
GCAGGATTAG CTACCATGCA GGTGATGATG CTCGCTGTCG CGCTGTATCT CGAAGTTTTT
GGGGACTTAG ACCCTGAATT TAGAAACTAT TTACGATACG TTAGTTTAGT TTTTGCAACA
CCAGTTATGC TTTATTCTGC ATTGCCTTTC TATATGAATG CATGGCGTAG CCTTAAAGCC
CGAACACTTG GGATGGATGT TCCGGTCTCT ATTGCGATGT TATTTGCCTA CTTTGCCAGT
GTTGTCGCGA CGGTAACAGA AAAAGGTGAA GTATTTTTTG AATCTGTCGC TATGTTTACT
TTTTTCTTGT TGCTTGGTCG ATTTCTTGAA ATGCGGGCAC GACGCAAAGC AGCTGCAATT
ACAGGGAATC TATTAAAATT AGTCCCAGTC ATGGCAACCC TACAATCAGG AAAAAGAGTT
CCTGCCAGAA CATTAGATAT TGATGATATT GTTATTGTTC CTCCAGGTGA GCATTTACCC
GCTGATGGCG TAGTAATCTC AGGATGTAGT GCGATTGATG AATCAATGTT TACTGGTGAA
TCCATGCCTG TAGCTAAGAA TGAATCAGAC CCTGTTTTTT CTGGCACGAT CAATGGTGAT
GGCAATTTAA CGGTTCGAGT AACCAAAACC AAAGCAGATT CATTAATTTC TACCATCGTA
AAATTACAAG ATGAAGCTCA AATGTCGAAG CCAAAAGTCG CAGAAATTGC AGATTTAATC
GCTAGATATT TTGTTGCGGG TATTCTGATT ATTTCTGCAT TTACTTGGTT CTATTGGCAT
GAAACAAAAC CTGATGATGC CTTTTGGATC ATGTTGTCAG TTTTAGTCGC AACCTGTCCG
TGTGCACTTT CTTTAGCAAC ACCAACAGCA ATCACTTGTT CTACTTCTCG TCTTGCGCAG
CTTGGATTAA TGTTACGTCG GGGGCACGTA TTAGAAACCC TCTGTAAAGT AAATCGCTTA
GTGATTGATA AGACAGGGAC CTTGACCGAA GGGAACGTTC AATTAACTCA TATACATTGC
TTTACCGACG TCACAGAAAA AGAAAGTAAA ACGTTAGCCG CAGAGCTTGA GTCTTTTGCA
AATCACCCTA TTGCTCGTGC TTTCTCTGAA TTTAGAGATC CAAATAAAAG TCATTTCGAC
CGCGTAGAAA ATATCATAGG CTCTGGTCTT ATTGGTTATT CAGGTAGTGA TGAATGGAAG
ATTGGTCATC ACCAATTTAC TTGTCCAAAA GCCACATTAG AAAATAAGCA AAATTACCAA
GTATGGTTAT CTAAAAATAA TTGCCCTATT GCGGCTTTTT CTTTAAATGA TCCGATTCGA
AAAGAAAGTT ATGAATTCAT TCAATCTCTT CATGCTTTAA ACATTAAAAT TACCATGTTA
ACAGGTGATA ATAGCTCGGC TGTTGCGAAA GTGGCTAAAG AATTAAATAT TGATACCGTT
ATCTCTGGTG TATCACCAAA AGGGAAATTA GATTATCTAA CCTCACTACC AAAAAATGAA
GTCTCTCTAA TGGTTGGCGA TGGTATAAAT GATGCCCCTA CACTCGCAGG TGCCCACCTT
TCCATTGCTA TGGGCTCAGG CACTGATGTC GCAAAAGCAT CCGCCGATAT GATATTGATC
GGTGATAACC TCACTCGCTT AATCGAAGCA CGAACATTAG CGATTAAAAC ACGTAAGATT
ATTCGCGAAA ACTTAGCATG GGCATTAGGT TATAATGCCA TAATTTTGCC ATTAGCCGTT
ATGGGCCTTG TTGCACCTTA TATTGCCGTT GTCGGTATGT CAGCAAGCTC TATTATCGTT
GTTTCCAACT CTTTAAGGTT ATTGAAAAAT GGCTAG
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| Protein sequence | MSKDCYHCNE PVPIGSSFQV DILGQKRDMC CLGCESVAQT IIDNGLSSYY QYRTAPADKA
NLVPDQLKAL EHYDHKEIQK EFVRTTENNK EVTLSLDGVS CAACAWLIEK QLAKAKGIHQ
ITVNTSTHRA LLSWDPKETE LSTLLTLIHQ LGYKAAPFEA DKQEEEYHRS MKQYLYRLGI
AGLATMQVMM LAVALYLEVF GDLDPEFRNY LRYVSLVFAT PVMLYSALPF YMNAWRSLKA
RTLGMDVPVS IAMLFAYFAS VVATVTEKGE VFFESVAMFT FFLLLGRFLE MRARRKAAAI
TGNLLKLVPV MATLQSGKRV PARTLDIDDI VIVPPGEHLP ADGVVISGCS AIDESMFTGE
SMPVAKNESD PVFSGTINGD GNLTVRVTKT KADSLISTIV KLQDEAQMSK PKVAEIADLI
ARYFVAGILI ISAFTWFYWH ETKPDDAFWI MLSVLVATCP CALSLATPTA ITCSTSRLAQ
LGLMLRRGHV LETLCKVNRL VIDKTGTLTE GNVQLTHIHC FTDVTEKESK TLAAELESFA
NHPIARAFSE FRDPNKSHFD RVENIIGSGL IGYSGSDEWK IGHHQFTCPK ATLENKQNYQ
VWLSKNNCPI AAFSLNDPIR KESYEFIQSL HALNIKITML TGDNSSAVAK VAKELNIDTV
ISGVSPKGKL DYLTSLPKNE VSLMVGDGIN DAPTLAGAHL SIAMGSGTDV AKASADMILI
GDNLTRLIEA RTLAIKTRKI IRENLAWALG YNAIILPLAV MGLVAPYIAV VGMSASSIIV
VSNSLRLLKN G
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