Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1558 |
Symbol | |
ID | 6987195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1669730 |
End bp | 1670176 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643379890 |
Product | hypothetical protein |
Protein accession | YP_002262990 |
Protein GI | 209695061 |
COG category | [S] Function unknown |
COG ID | [COG3120] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00564355 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATC AACAACTTGA AAACTTGGAA GCTGGTTGGA AATGGATGTA TTTATTTAAT AAACATCGTA TGGGGGAATC TATTACTTGT TATATCGATT CAAGTGAAGA ACAACAGATG GTTAATGTCT TTTTAAAATT AGAACATGAA CCCGTTCATG TTCTTGAATG GATTCAAAAA CACATGAATC CGGATTTACA AAATAAGTTA AAACAAGCGA TTAGAGCAAA AAGAAAGCGT CACTTTAACG CAGAACAAGA ACATACACGT AAGAAGTCTA TAGATTTAGA TTATAGAGTA TGGGAAAAGT TGTCTCTTAG AGCACAAGAA CTTGATTCAA CACTCTCTGA TACTATTGAG TATTTGTTAA GTGAGGCTTC TAGAACAGAA AAAGCAAGCC AAACAGTGTC ATCATTAAAA GCAGATTTAC ATGAATTATT AAAATAA
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Protein sequence | MKYQQLENLE AGWKWMYLFN KHRMGESITC YIDSSEEQQM VNVFLKLEHE PVHVLEWIQK HMNPDLQNKL KQAIRAKRKR HFNAEQEHTR KKSIDLDYRV WEKLSLRAQE LDSTLSDTIE YLLSEASRTE KASQTVSSLK ADLHELLK
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