Gene VSAL_I1556 details

Gene Information

• Locus tag: VSAL_I1556
• Symbol: fabA
• ID: 6989114
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 1667298
• End bp: 1667816
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643379888
• Product: 3-hydroxydecanoyl-(acyl carrier protein) dehydratase
• Protein accession: YP_002262988
• Protein GI: 209695059
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000942388
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAACA AACCTAGTTC ATATGATCGC GAAGATTTAC TAGCATCAAG CCGTGGCGAA 
CTATTTGGTC CAAATGGCCC ACAATTACCA GCTCCAAACA TGTTGATGAT GGATCGTATT 
CCACTAATGT CTGAAACTGA AGGTTTATTT GGTAAAGGCA AAGTTATCGC TGAACTAGAT 
ATTACTCCAG ACTTATGGTT CTTTGATTGT CACTTCCCTG GTGATCCAGT AATGCCTGGT 
TGTCTTGGTT TAGATGCGAT GTGGCAACTT GTTGGCTTCT TCCTTGGTTG GGTTGGTGGT 
CAAGGTAAAG GGCGAGCTCT TGGTGTTGGT GAAGTTAAAT TCACAGGACA AGTACTCCCT 
ACTGCTAAAA AAGTAACGTA TGAAATCGAC TTTAAACGTG TTATCAATCG TAAATTGGTA 
ATGGGTTTAG CTGATGGCCG CGTTCTTGTG GATGGCAAAG AAATCTATGT TGCAAAAGAT 
TTAAAAGTGG GCCTTTTCCA AGATACGTCT GCATTCTAA 

 

Protein sequence

MQNKPSSYDR EDLLASSRGE LFGPNGPQLP APNMLMMDRI PLMSETEGLF GKGKVIAELD 
ITPDLWFFDC HFPGDPVMPG CLGLDAMWQL VGFFLGWVGG QGKGRALGVG EVKFTGQVLP 
TAKKVTYEID FKRVINRKLV MGLADGRVLV DGKEIYVAKD LKVGLFQDTS AF