| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1554 |
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| Symbol | |
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| ID | 6989364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1665104 |
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| End bp | 1666768 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379886 |
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| Product | hypothetical protein |
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| Protein accession | YP_002262986 |
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| Protein GI | 209695057 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0365139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA AATTACAATT AACCACATTA GCTGTTTTAG TGTCCGCTGC GCTTCCTGCG
CAAGCGGCGC TTTATAAAGT GGTGGAAGTA ACCCCAAGTG TTTCAGGTTC TGAGTACTAC
GGTACTGCGA TTGAGCCATC TCCAATTACG GATAATGGTG CAAATAGTTT AGGTTGTTTT
GAAACGACAG CTTCATCTGT AACATGTGAA GGCTATAAAT TAGCTGGTGA AACTCGTGAC
CGTGCTGAAG GGGTTTCATA TACTGAAGAA GTTCCTTTTG CGATGGATAA TTCCTTTGGC
TATATCGAAG ATGATTATGA TGGCTTTGTA AACTATTGTT TTTACCAACT AGGCTACTCT
ACCTGTAAAT ACTGGGCTAA TAATCAGTGG ACTGGTTGGT CTAACGAGAT TTATGGCAGT
AATGATAAAA ACTCTTTAGC ATTTGTTACT GATGGTGGAA CTATTGCTGC TAGTGGAATT
AATACGGTCA TTAATTCGCT TGATTCAGCT GGCGCTGCTG TTGGGAACTT TAGTTCTACT
ACTAATAGAA ATGCACCAAT AAGTGGCGAT AGTATTACTG GCTTTCAACA AGGCCGTCAA
TGGTCTACTG ATGGAACTTA TACGGTAGGA AGTGTTACTT CGAAAACAGG CATTGGTGCT
GATAGGTATG ATTACTATTC AAAACCAGCC GTATGGACAA AGTCAACATC AACGCTAACG
GCTGTTAATT GGGCGCATGA TGACGAAGAA GATGGCGATT ATTATGCGCA AGGCAGTATG
CGTGATCTGT ATGTGAATGG TACGGAGTTT TATGGTGTTG GTTATAATAA CTATGATGAC
CAACACATGA ATGCCACTAT ATTTCAAGCT TCAATAAATG TAACTACGGG TGCTTTAGGA
ATTGTTGGGT CTACTCTAAT TAGTGGTGCT CAGGTTGAAA TTAGTGGTGA TAACGTTAAC
TCTAATTCAG TTGCTACGAA CATTAATGAC AATTTAGTTG TTGTCGGTCA AGCTAAGCGT
TCTGGTAGTT ACCCCCAAAA TGGGGCGGCG GGAAATCGTT TATTCGTTAC TTCTGCAACT
TCGCCAACGG CTCACTTCCT GGATTCATCA GATGGAGAGA TCTTCTTTAA CGGTGTTGGT
GGGGAGATGG GGAGCATCAA TAATTTCAAT GAGATTGTTG GTCGTATCGA TGTTGATACA
TTCCGTGAGT ATGATGGTAA ACAACGCCGC CAGCGTGCGT TTATTTATCC ATACAAACCA
ACAGAATCTG CGCGTGCTGA TATTTTTCAA AATAAAGCAT GGATCATCGA TAATTTAACG
AACGGTGGTA CATACTCTGG AAATAATAAC CAATATCGTA TTTATGATGC GACGGATATT
AATGATGCTG GCGTTATCTC GGCGACTGCG ACTAAATGTT ATGATGAAAA TGGATCTACA
GTTCAAGAGT ATGATTCAAC GGTTCATGAT GCATATTGTG GTGACGGGAA TGGTACTGAA
AAAATTGTAG CGGTTAAATT GGTTCCGATC TCAGATCCTG CTAACCGAAA CATTGAAACT
CGTGGTTATG AGAATAATAC AACAGAACGT CAAGGCGGTT CATTAGGCTT TGGGGCTCTG
ACATTACTTG GTTTGTTTGG TTTCATGCGT AAACGTAGTA AATAA
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| Protein sequence | MSNKLQLTTL AVLVSAALPA QAALYKVVEV TPSVSGSEYY GTAIEPSPIT DNGANSLGCF
ETTASSVTCE GYKLAGETRD RAEGVSYTEE VPFAMDNSFG YIEDDYDGFV NYCFYQLGYS
TCKYWANNQW TGWSNEIYGS NDKNSLAFVT DGGTIAASGI NTVINSLDSA GAAVGNFSST
TNRNAPISGD SITGFQQGRQ WSTDGTYTVG SVTSKTGIGA DRYDYYSKPA VWTKSTSTLT
AVNWAHDDEE DGDYYAQGSM RDLYVNGTEF YGVGYNNYDD QHMNATIFQA SINVTTGALG
IVGSTLISGA QVEISGDNVN SNSVATNIND NLVVVGQAKR SGSYPQNGAA GNRLFVTSAT
SPTAHFLDSS DGEIFFNGVG GEMGSINNFN EIVGRIDVDT FREYDGKQRR QRAFIYPYKP
TESARADIFQ NKAWIIDNLT NGGTYSGNNN QYRIYDATDI NDAGVISATA TKCYDENGST
VQEYDSTVHD AYCGDGNGTE KIVAVKLVPI SDPANRNIET RGYENNTTER QGGSLGFGAL
TLLGLFGFMR KRSK
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