Gene VSAL_I1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1542 
Symbol 
ID6987187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1645945 
End bp1646397 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content36% 
IMG OID643379876 
Producthypothetical protein 
Protein accessionYP_002262976 
Protein GI209695047 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA AAAATTATCA ACGACTAACG CAACAAGCAA TCGGCCTTAT TGAAGATGAA 
CCTGATTTTA TTGCTAATCT TGCAAATATA AGCGCATTAC TGAACATGGA GCTTGATGAC
ATTAATTGGG TTGGCTTTTA TCTACTTAAA GACGATGAAT TAGTATTAGG ACCGTTCCAA
GGGAAACCCG CTTGTATTAG GATTACGATA GGTAAGGGCG TATGCGGAAC TGCATTTTTA
ACTGAAACAG TTCAACGTAT TGAAGATGTT CATGAATTTG ATGGACATAT TGCATGTGAC
GCGGAAAGTA ATTCAGAAAT CGTAATTCCA TTTTATAGAA ATGGAAAGTT GGTTGGTGTC
TTAGATATAG ATAGCCCAAA TATTGGTCGA TTTAGTGAAA TTGACGAAAA AGGACTGGCT
GATTTCATGA AAGAAGCAGA AAAGAGACTT TAA
 
Protein sequence
MNLKNYQRLT QQAIGLIEDE PDFIANLANI SALLNMELDD INWVGFYLLK DDELVLGPFQ 
GKPACIRITI GKGVCGTAFL TETVQRIEDV HEFDGHIACD AESNSEIVIP FYRNGKLVGV
LDIDSPNIGR FSEIDEKGLA DFMKEAEKRL