Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1542 |
Symbol | |
ID | 6987187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1645945 |
End bp | 1646397 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643379876 |
Product | hypothetical protein |
Protein accession | YP_002262976 |
Protein GI | 209695047 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1956] GAF domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA AAAATTATCA ACGACTAACG CAACAAGCAA TCGGCCTTAT TGAAGATGAA CCTGATTTTA TTGCTAATCT TGCAAATATA AGCGCATTAC TGAACATGGA GCTTGATGAC ATTAATTGGG TTGGCTTTTA TCTACTTAAA GACGATGAAT TAGTATTAGG ACCGTTCCAA GGGAAACCCG CTTGTATTAG GATTACGATA GGTAAGGGCG TATGCGGAAC TGCATTTTTA ACTGAAACAG TTCAACGTAT TGAAGATGTT CATGAATTTG ATGGACATAT TGCATGTGAC GCGGAAAGTA ATTCAGAAAT CGTAATTCCA TTTTATAGAA ATGGAAAGTT GGTTGGTGTC TTAGATATAG ATAGCCCAAA TATTGGTCGA TTTAGTGAAA TTGACGAAAA AGGACTGGCT GATTTCATGA AAGAAGCAGA AAAGAGACTT TAA
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Protein sequence | MNLKNYQRLT QQAIGLIEDE PDFIANLANI SALLNMELDD INWVGFYLLK DDELVLGPFQ GKPACIRITI GKGVCGTAFL TETVQRIEDV HEFDGHIACD AESNSEIVIP FYRNGKLVGV LDIDSPNIGR FSEIDEKGLA DFMKEAEKRL
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