| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1540 |
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| Symbol | |
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| ID | 6987185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1642790 |
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| End bp | 1644016 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379874 |
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| Product | paraquat-inducible membrane protein A |
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| Protein accession | YP_002262974 |
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| Protein GI | 209695045 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
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| TIGRFAM ID | [TIGR00155] integral membrane protein, PqiA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.541735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAGACG CTAAGTTTCG TCGCTGTCAC GGTTGTGACC TTGTTGTAGA AGTAGCGAAG
GTAGACAAAA AGCAAAATGC TCACTGTCCT CGCTGCAATA CGCAGCTTTA TCGTGGTAAT
CGTATTTCAC TAAACAGTGA TTTGGCGATT GCCATTGCTG CGTTGTTACT ATTTATACCT
TCGCATTTTT TCCCACTCGT CACCATTAAA CTATTTGGTG TCATGATCCC TGCTACATTG
CCATCAGGTT CAATCACTCT GATGTCTGAA GGGTTCCCAA TGCTTGGGTT ATTGATTCTA
TTTTGCAGCT CTATTGCGCC TCTGCTTGTA TGTTCTTCCG TTGTCGCAGC ACACCTTGCC
CTTAGAAAAA AATGGTTTAA TTTATTTCGT ATAAGCGTTA CTACAGTACA ACACTTAAAA
AATTGGATGA TGTTAGATGT CCTTCTCGTC AGTTTAGCGA TTGCTTGTTT TAAAATACAA
GACCATGCCG ATATTTTTGT CGGCTCTGGA TTATACGGAT TAATCCTTTT GCAGTTTGTC
ACTTCTTTAC TGCTCACTCA TGTAAGTGCG AGACGCTACT GGCGAGCATG GCAAAGAAAA
AATCAAACGA AGATTGAAGC TCCAATTACG GACCCTCTCA ATTCAATACA TTGTGAGCAC
TGCCATTTTA CCCAACAAGA TGGAACTCAT TGTGTTCGAT GTAAACGTGC GATTCACAAA
AGAAAACCAA GGTCCATACA AAAAACATGG GCTTATTTAA TCGCTGCTAG TATTTTCATT
ATTCCTGCGA ATATTATTTC CATTTCAATT TTGTTAACAA ATGGTAAGCG CCTTGAAGAC
ACTATTTTTT CTGGGGTTGC AGGGCTCATT CAATCGAACA TGTACGGTAT TGCCATCATA
ATCTTTGTTG CCAGTATCAT CGTACCTGTG GCGAAAATAC TGGGGCTAGG TTACCTGCTC
CTTTGCATTC AATTTAAACG TACTATTTTT CATCGCCAGC GAATGTCTAT CTATGTCGCG
GTAAAATTGA TAGGGAAATG GTCAGTCATG GATTTATTCG TAATTTCAAT TATGATGACC
TTGATTGACC GTGGACAAAT TTTAGATTTT ACACCCGGAA TGGGTGCAGT AGCCTTTGGC
TTAGTTGTAG TTTTTACTAT GCTAGCCGTA GAAAGTTTTG ATTCTCGTCT AATTTGGGAT
AATTATGAAC GCGCCAAAAA CCGTTGA
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| Protein sequence | MEDAKFRRCH GCDLVVEVAK VDKKQNAHCP RCNTQLYRGN RISLNSDLAI AIAALLLFIP
SHFFPLVTIK LFGVMIPATL PSGSITLMSE GFPMLGLLIL FCSSIAPLLV CSSVVAAHLA
LRKKWFNLFR ISVTTVQHLK NWMMLDVLLV SLAIACFKIQ DHADIFVGSG LYGLILLQFV
TSLLLTHVSA RRYWRAWQRK NQTKIEAPIT DPLNSIHCEH CHFTQQDGTH CVRCKRAIHK
RKPRSIQKTW AYLIAASIFI IPANIISISI LLTNGKRLED TIFSGVAGLI QSNMYGIAII
IFVASIIVPV AKILGLGYLL LCIQFKRTIF HRQRMSIYVA VKLIGKWSVM DLFVISIMMT
LIDRGQILDF TPGMGAVAFG LVVVFTMLAV ESFDSRLIWD NYERAKNR
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