| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1539 |
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| Symbol | |
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| ID | 6987184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1640170 |
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| End bp | 1642812 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379873 |
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| Product | hypothetical protein |
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| Protein accession | YP_002262973 |
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| Protein GI | 209695044 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.123668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGC CAAAAACCGT TGATTCTTCA ATCGAAAAAG TAAACATCAA AACCGAACGT
GGAATATCCC CACTTTGGAT CTTGCCCTTA CTTGCCCTTT GCTTAGGCGG CTGGCTTGTA
TATTCTGCTT TTGTCGAGGC AGGACAACGT ATTCAAATTT ATTTTGATGA TGCTCAGGGC
TTAACCGCAG GTAGAACAAC CATTCGCTAC CAAGGCTTAG AAGTCGGTAT GGTCAAAAAC
ATTACTTTAT CGAAAGACTT ATCGAATATC TATGTAGATG CTGACATTTA TCCTGAAGCG
TCCGAGCTAT TAAAAGACAA CACTCAGTTT TGGTTAGTAA AACCACAAGC CTCGTTAACT
GGGATTTCAG GGCTAGACGC TCTTGTTTCT GGTAACTACA TTGCGATTTT ACCGGGTTCA
GGCGAAGCAA AAACACAATT TAATGCATTG GCTAACTCCC CTGTCATTCA ACCAAATTCG
ACGGGATTAA ACATTACATT GAGATCCAGT GATCTTGGTT CGATCTCGGT TGGTTCAAAA
ATCTATTATA AAAAAATTCC GATTGGTGAA GTGTATAACT TCAAATTAGA TGAAAAGACC
GACAAGATAA AAATCAAAGC CTTAATTGAT GAAGAATATG CTCATTTAAT TACGTCTAAA
AGTCGCTTTT GGAATGCCAG TGGCATTGGT GCCAGTATTG GGTTTGATGG CGTTGATGTG
CAATTTGAAA GTTTATCGGC CTTAATTGGT GGGGCTATTG CTGTGGATTC ACCCGATGAT
GGTAAAGCGA TTGATAATGG TGAAGAATTC CGTCTTTACT CAAATATCAA AACCGCTGGC
CGTGGTATTT CCATTAAAAT AACACTACCG GACAATAACC AAATTAGTCC TAATGGTTCA
TCGATTATGT ACCGAGGATT AGAAATCGGT CAGATCAACA GCTTAAAATT ATCAGACGAT
AAAAAAGATA TCATTGCATC AGCAACCGTT GAACCCGCGT TTGCTGATTA CTTAAATGAT
GGCTCTCGTT TCGTACTAGA AGAAGCGAAG GTCGGCCTTT CTGGTGTCGA AAATATCGGT
AATTTAGTCC GTGGTAACTT CTTAACACTG GTTCCTGGTG AAGGAGATAA ATCACGAACG
TTCTCCGCTA TTCGTAAACC AGAGTTAATA AAACAAGACG CTAAGGCAAT AACGTTCTCT
TTATACGCAG ATCGCTCATT TGGTTTAACT GCGGATACTA AAATCTTATA TAAAGGTATT
AAAGTTGGTT CGATCACTCA CGTCGCTTTA GTTGGTGACC GAGTCAAATT TGAAGCAATG
ATTTTTGAAC AATACAAACG CCTTATAAAA TCACATAGCA AATTCTTTGT TTCTGGTAGT
GTCTCTGCCG AATTAACCGA TTCAGGACTA AGTATTGATG TTCCTCCCGC TCAAGAATTG
ATCTCAGGCT CGATAAGTTT CACGAGTGAA GGTAAAGGGT ACAAGCAAAA GAATTACACG
TTATTTAAAA ACAGTTCATT AGCCGAGCTC GCTCAATTTA AAACAGAAAA AAGTACAGAG
CTCACTTTAT TTAGTGCAGA ACTTCCTCCT ATTACCAAGA ACAGCCCTAT TCTTTATCGT
AACCTTGTTG TTGGTAAAGT GACGGATTTC AGCCTTGGTA ACGATGGCGT AAACATTAAA
GTAAATATTG AAAAGCAATA TGCTCACCTT ATTCACAGTG ACACTGTATT TTGGAATTAT
TCTGGCGTTA ATGTTGAAGC CAGCTTAAGT GGTGTAAATA TTCAAGCGGC CCCTCTACTA
TCCATGATCC GTGGTGGTAT TGGTTTTGAT AACATTCAAG GCGTAGAAAA TAAATTAGGT
CAAAAGTGGA AGCTCTACTC AACTCTTTCT GAAGCACAAG CATTCGGGAA GATCATTGCT
TTCACTGCGA AAGACAGTTC ATCAATATCA AAAGGAACAC TGATTAAATA TCAGGGCGTT
ACTGTTGGTG AGATAAGTAA GGTAACACCA AACTTCAAAC AAAGTAATGT GTATATACAG
GCTCGGATCT TTCCAGAATA CGTAAATCAA ATTGCCATTC CAGGCAGCCA TTTTTGGGTA
GTAAAACCAA CAATTAGCCT GACTAAAACA GAAAATCTAG ACACACTGCT TGGCAGTTAT
ATTCAAGTCA CACCAGGAAA AGGAAAAGGA AAAGTACAAA CTCAATTTTC TTTAACTGAC
CAACCACAAG CCGCTGCACT TATAAGTTAC ACCTTAGAGT CATCCACTCG CGGGTCTGTT
AAAGTAGGCA CCCCACTTTT ATTTAGAGAA ATTGAAGTCG GTGAAGTCGT TGATGTTAGG
TTAGGTGATC TATCTGACCG TATTATTATC ACTATTGGTG TTCAACCAAA CTATGCTTAT
TTAATTCGAG AGAACAGTGT TTTCTGGAAT GTATCTGGTG TAAATATGTC GATTGGTATC
AGCGGTGCAA AAGTTCGAGC CGGTACTGTT GATAGCATCT TACGTGGCGG GATTGCTTTC
TCTACCCCAG ATGATGAATC TTTAGCTCCA CAGGCAAAAG AAAACAAATC ATACTTACTG
TATAAAACAT CAGAAGACGA TTGGCCGTTG TGGAACGCAG CAATACCAAA CCCAAATAAA
TAA
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| Protein sequence | MNAPKTVDSS IEKVNIKTER GISPLWILPL LALCLGGWLV YSAFVEAGQR IQIYFDDAQG
LTAGRTTIRY QGLEVGMVKN ITLSKDLSNI YVDADIYPEA SELLKDNTQF WLVKPQASLT
GISGLDALVS GNYIAILPGS GEAKTQFNAL ANSPVIQPNS TGLNITLRSS DLGSISVGSK
IYYKKIPIGE VYNFKLDEKT DKIKIKALID EEYAHLITSK SRFWNASGIG ASIGFDGVDV
QFESLSALIG GAIAVDSPDD GKAIDNGEEF RLYSNIKTAG RGISIKITLP DNNQISPNGS
SIMYRGLEIG QINSLKLSDD KKDIIASATV EPAFADYLND GSRFVLEEAK VGLSGVENIG
NLVRGNFLTL VPGEGDKSRT FSAIRKPELI KQDAKAITFS LYADRSFGLT ADTKILYKGI
KVGSITHVAL VGDRVKFEAM IFEQYKRLIK SHSKFFVSGS VSAELTDSGL SIDVPPAQEL
ISGSISFTSE GKGYKQKNYT LFKNSSLAEL AQFKTEKSTE LTLFSAELPP ITKNSPILYR
NLVVGKVTDF SLGNDGVNIK VNIEKQYAHL IHSDTVFWNY SGVNVEASLS GVNIQAAPLL
SMIRGGIGFD NIQGVENKLG QKWKLYSTLS EAQAFGKIIA FTAKDSSSIS KGTLIKYQGV
TVGEISKVTP NFKQSNVYIQ ARIFPEYVNQ IAIPGSHFWV VKPTISLTKT ENLDTLLGSY
IQVTPGKGKG KVQTQFSLTD QPQAAALISY TLESSTRGSV KVGTPLLFRE IEVGEVVDVR
LGDLSDRIII TIGVQPNYAY LIRENSVFWN VSGVNMSIGI SGAKVRAGTV DSILRGGIAF
STPDDESLAP QAKENKSYLL YKTSEDDWPL WNAAIPNPNK
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