Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1535 |
Symbol | |
ID | 6987181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1635734 |
End bp | 1636627 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379869 |
Product | membrane protein |
Protein accession | YP_002262969 |
Protein GI | 209695040 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0752251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTATTC TTTTGCTGTT ACAAATTAGC CTTATTATTG GTGGGTTAAT TTTTCTTTAT ATGTTGATTT CATTATGGCT CAGAAAAAAA GAATCAGAGA AAAAAACGAA CGTATGGGCG ATTGGTCTGA TTGGTGGTTT TGCTAACTTT TGCGACACGT TAGGTGTAGG CAGTTTTGCA ATAAAAACGG CGGGCTATAA ACAATTTAAT TTGGTTGATG ACCGAGTATT ACCTGGGACA TTAAACGCTC AAGCGACGAT GGCGACAGTA TTTCAAGCAT TGATTTTCTT AACTGCAGTT AATGTTGATT TAACCACGTT ATTGAGCCTA ATTATTGCGG CTTGTGTCGG GGCAACGGTA GGGGCTCGCT TGGTATCCAA TTTTGATCGT CAATTGATTC GTTTAATTAT GGCTGGTGCG TTATTTATTG TTGCGATGTT GATGTTTGCT GGTCGTTTTG AATTATTCCC ATTGGGCGGT GATGAGCTCG GTCTCTCGGG TGAAAAATTA GTTATTGCTG TTATTGGTAA TTTTATTTTT GGTGCCTTGA TGACGGTTGG TATTGGGTTG TACGCGCCTT GTATGACGAT GATTTATTTA TTAGGGATGA ACCCACTGGC GGCTTTTCCT ATTATGATGT GTTCATGTGC TTTCTTATGT TTTTTCTCTG CCGGTGGCTT TATTAAACAA AAAGCCGTGA ATTCTAGGGC CTCATTGGTT GTGGCCATTA CAGGGCCGAT TGGGGTATTG ATTGCTGCTT TTATCGTGAA GTCTCTTGAT GTTGATATGC TTGCTTGGCT AGTGGCAATT GTTGTTCTAT ATACCGCCAT TATGATGCTA CGTTCTTGGT GTGCAGGCCG AAATGAGGTG ATGATTGAAT CAACCGATCA ATAA
|
Protein sequence | MTILLLLQIS LIIGGLIFLY MLISLWLRKK ESEKKTNVWA IGLIGGFANF CDTLGVGSFA IKTAGYKQFN LVDDRVLPGT LNAQATMATV FQALIFLTAV NVDLTTLLSL IIAACVGATV GARLVSNFDR QLIRLIMAGA LFIVAMLMFA GRFELFPLGG DELGLSGEKL VIAVIGNFIF GALMTVGIGL YAPCMTMIYL LGMNPLAAFP IMMCSCAFLC FFSAGGFIKQ KAVNSRASLV VAITGPIGVL IAAFIVKSLD VDMLAWLVAI VVLYTAIMML RSWCAGRNEV MIESTDQ
|
| |