Gene VSAL_I1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1530 
Symbol 
ID6987176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand+ 
Start bp1631245 
End bp1631928 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content35% 
IMG OID643379864 
Productmembrane protein 
Protein accessionYP_002262964 
Protein GI209695035 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.221932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AAAGACTCTT ATTACTTGTT CTTCTTGCCT CTTTCGCCTT TGTTTATTTT 
AAATTTGGTG ATCTTTTAAC ATTAGAACAA GTGAAAGAAT TTCATCTCAA TCTGCAAAAT 
GATGTGAAAG AAAACTTGTT TTTATACAGC GGCATGTACT TTATTGCGTA CATTGTTATT 
ACTGCTTTAT CTATTCCTGG TGCGGCGGTT GTTACATTAT TAGGAGCAGC ATTATTTGGC 
TTCTGGTGGA GTTTATTGCT TGTGTCGTTT TCAAGTTCGA TAGGCGCAAC AATTGCTTTT 
TTAAGCAGCC GTTATTTACT GAGAGAGTGG GTAGATAACA AATTTAAAGA TAAGCTTATA 
CCAATTAATC AAGGCGTAGA AAAAGACGGT GCTTTTTATT TACTGACTTT ACGGTTAATT 
CCTATCTTTC CGTTCTTTTT AATTAATCTA CTTATGGGCC TAACAAAGCT AAGCGCAGGA 
CGCTTTTATC TCTTTAGCCA GATAGGTATG TTACCCGGAA CCATGGTTTA TTTGAATGCA 
GGGACTCAGT TATCAGAGAT AAACTCGCTG TCAGGTTTAA TTTCTCCTCA AATTTTAGGT 
TCATTGGCTT TGCTTGGTTT ATTTCCTATA GTAATTAAGT TCTTAATGGG AAAACTACAA 
AAAAACCGTA CACAAGAGGG ATAA
 
Protein sequence
MNKKRLLLLV LLASFAFVYF KFGDLLTLEQ VKEFHLNLQN DVKENLFLYS GMYFIAYIVI 
TALSIPGAAV VTLLGAALFG FWWSLLLVSF SSSIGATIAF LSSRYLLREW VDNKFKDKLI 
PINQGVEKDG AFYLLTLRLI PIFPFFLINL LMGLTKLSAG RFYLFSQIGM LPGTMVYLNA 
GTQLSEINSL SGLISPQILG SLALLGLFPI VIKFLMGKLQ KNRTQEG