Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1529 |
Symbol | |
ID | 6987175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1630666 |
End bp | 1631229 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379863 |
Product | putative glutaredoxin |
Protein accession | YP_002262963 |
Protein GI | 209695034 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0695] Glutaredoxin and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.164431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCCAA TAAAAATTAC ATTATATCGC TGGGCAGGAA GTTGGGGACC TTTCAAGGTT AACGTTCCTT GTGGTGAATG CACATTAACT AAAGATATTC TTCAAGATAC TTTTGATACC GAGCTTGCCG GTATTCCGAT TGAATTAGAA GTTAAAGATT GGTTATCACA TTGGTGGGAA CCATTAAAGC TTAAAGCATG GCATGCACCG ATCATTATTG TTGAAGATAA GGTCATTAGC CAAGGTGAGG CATTGAATCG TGGAGTGCTT GTTCAAGCCG TGATAGCGAA AGTCGCTCAA CGTGATGAGA TAAAAGGTAA TGTTGTTTTT GGTAAAGCAA CCTGTCCTTT TTGTATCAAG GCAAAAGCCG CTTTAGATGA AGCGGGTATT GAATACACTT ATCATGACGT GGTTAAAGAC AGCGCAGCTC TTTATCGAAT GATCCCTGAA GTGAAAGCGA TCATTGGAGA GAAAACCCCC GTTACTGTGC CACAAATTTG GTTGGACGGT AAATACATTG GTGGATTTGA TAATCTTGAA AAATCGATGA CAATGACTGA TTAA
|
Protein sequence | MKPIKITLYR WAGSWGPFKV NVPCGECTLT KDILQDTFDT ELAGIPIELE VKDWLSHWWE PLKLKAWHAP IIIVEDKVIS QGEALNRGVL VQAVIAKVAQ RDEIKGNVVF GKATCPFCIK AKAALDEAGI EYTYHDVVKD SAALYRMIPE VKAIIGEKTP VTVPQIWLDG KYIGGFDNLE KSMTMTD
|
| |