| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1527 |
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| Symbol | |
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| ID | 6987173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1629520 |
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| End bp | 1630077 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643379861 |
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| Product | HTH-type transcriptional regulator, TetR family |
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| Protein accession | YP_002262961 |
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| Protein GI | 209695032 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.718491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGAAG ATAAGAGAGT TAATGCACTG CAAAAAACGA TAGAGCTGTG TGCGTTACAT
GGTTTTCACG GTACAAGCAT GGATAAAATA ACGGCCGCGA CTGGTTTATC CAAGGCGACC
ATCTATAAAT ATTTTCAATC AAAAGAGAAT TTAATCGCTA AAGCGTTGGA ATTGTTTAGC
GAGCAATCAC TCTCGAACGT GAAGGCGCTT TTTGAGAATT CAGAACTTAC TTTAAAGCAA
AAAATATCTT TGCGCTTTGA GGGACTCTCT GGTTGTATTG ATATCCCATC ATTTAATGGC
TGCTATTTTC AATTAGCTTA CAGTGAGTAT AGCCATGAAG ATAAAGCGAT AACGGAAGTG
AGCGCTAAAT ATAAGCAGAG AACTCAAGAG TTACTCATTG AGCTTCTTAA GCGTCATCAT
ATTGAAGATG CAGAGCTAAA AGCGAGAAAG ACAGGGATAG TATATAACGG ATTGTTAGCG
TCGTTACAAC TCACTAAAGA CGCTTCATTA ATTGAACTTG CTCATGAAAT GTTTTTAGAT
ATCATCGATT CTAAGTAA
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| Protein sequence | MKEDKRVNAL QKTIELCALH GFHGTSMDKI TAATGLSKAT IYKYFQSKEN LIAKALELFS
EQSLSNVKAL FENSELTLKQ KISLRFEGLS GCIDIPSFNG CYFQLAYSEY SHEDKAITEV
SAKYKQRTQE LLIELLKRHH IEDAELKARK TGIVYNGLLA SLQLTKDASL IELAHEMFLD
IIDSK
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