Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1501 |
Symbol | |
ID | 6987149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1607512 |
End bp | 1608273 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643379838 |
Product | hypothetical protein |
Protein accession | YP_002262938 |
Protein GI | 209695009 |
COG category | [S] Function unknown |
COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.420206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGA TCATGAACGC CGATGATTTT GGCTTATCAG AAAGTGTGAA TAATGGCATC GTTGAATGCT TTAAATCAGG TATCGTTACC TCAACCACCA TAATGATGAA TCAAAAAGGC GTTGAGCACG CAGCACAACT GTATAAACAA GGTTTAGTCC CTGAGATTGG TTTGCATTTT ACCGTCACCG CAGGACAGCC ACTGTCAGAT CCTTTGATGG TATCAAGCTT AGTTGACGAA CATGGTTATT TTTTGGATAG AAAAACCTTA ATGAATAAAA ATGTATGTGA AGAAGAAGTC TATATTGAGC TTCACGCACA GTACAATGCC GCTATTGAGT TGGGCTTGAA TATTAACCAC ATTGATAGCC ATCATTTCGC TGGTGTCTAT CCACCACTAA AAAAAGCATT TATCCGTTTT GCTAATGAGA TTAACCTCCC AGTTCGCCGA ATAGATAACA TCAGTCACGG GCAAGATGGG CTAACAGTGC GAACTCCTGA TGCGTTTGAT GCTCAGTTTT TTGATTCAGG CGTCTCTCTT GAGCAACTAA AAACACTAAT TTTAAGCTAT AAAGACACGC TTTCTGATGG CATTTTAGAA CTGATGTGTC ACCCAAGTAC AGAAGACAAT TCTGATCTTA CTGAGTTAAC CAGTTACATG GCTATGCGTG TAATAGAAAG AGATTTACTG ACGTCGCCAG AATTATCACA CTGGCTTAAA AAAGAAGGGA TTGAATGCGT TGGTTTTAAT GCGTTGTCTT AA
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Protein sequence | MKLIMNADDF GLSESVNNGI VECFKSGIVT STTIMMNQKG VEHAAQLYKQ GLVPEIGLHF TVTAGQPLSD PLMVSSLVDE HGYFLDRKTL MNKNVCEEEV YIELHAQYNA AIELGLNINH IDSHHFAGVY PPLKKAFIRF ANEINLPVRR IDNISHGQDG LTVRTPDAFD AQFFDSGVSL EQLKTLILSY KDTLSDGILE LMCHPSTEDN SDLTELTSYM AMRVIERDLL TSPELSHWLK KEGIECVGFN ALS
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