| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1453 |
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| Symbol | fdhA |
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| ID | 6987107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1570330 |
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| End bp | 1573185 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643379799 |
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| Product | formate dehydrogenase |
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| Protein accession | YP_002262899 |
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| Protein GI | 209694970 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGA CTAAACGTTC CGATTCGGTA CAAAAACAAG AGAACCAACT GGGCATTACT
CGTCGTATGT TCATGCGTAC CTCAACGATT GCCGCTGGTG CAGTAGCAAG CGCAAGCATG
TTTGTTTCAA GCATGATGAG AAAAGCACAA GCACAGGAAG TGCCAGTTGA TGCACCAACA
GAAGTGAAAC GTACGATTTG TTCACACTGT TCTGTTGGTT GTGGTATCTA TGCTGAAGTT
CAAAATGGCG TGTGGACAGG TCAAGAACCT GCATTCGATC ACCCATTTAA CGCAGGCGGT
CACTGTGCGA AAGGCGCAGC ACTGCGTGAG CATGGTCATG GCGAACGTCG TCTAAAATAC
CCAATGAAGC TTGAAAATGG CAAGTGGAAA AAACTGTCAT GGGATGAAGC GATCGAAGAG
ATTGGCAACA AAGCACTTGA GATCCGTAAA GAATCAGGTC CAGACTCAGT TTACTGGTTA
GGTTCTGCGA AGCACAACAA CGAACAAGCG TATTTGTACC GTAAAATGGC CTCATTATGG
GGAACAAATA ACGTCGATCA CCAAGCGCGT ATTTGTCACT CAACCACAGT AGCCGGTGTT
GCAAACACGT GGGGTTACGG GGCGATGACG AACTCGTTCA ATGACATGCA TAATTGTAAA
TCTATGCTAT TCATTGGTTC AAACCCTGCA GAAGCTCACC CAGTAGCAAT GCAACATATT
CTGATCGCAA AAGAGAAGAA TGGTTGTAAG ATCGTTGTTG CCGACCCACG TCGCACACGT
ACGGCAGCAA AAGCCGATCA TTATGTTTCA TTGCGTCCGG GCTCTGATGT TGCCTTTATT
TGGGGCGTAT TGTTCCATGT ATTCGCAAAT AAGTGGGAAG ATCAAGAATT CATTAACCAA
CGTGTGTTTG GTATGGATGA GATCCGCACA GAAGTTGCAA AATGGAACCC TGCTGAAGTG
GAACGTGTTA CTGGCGTGAC AGAAGCAGAA GTATATGAGA CTGCAAAACT GCTTTCAGAA
AACCGTCCAG GTTGTGTTGT TTGGTGTATG GGTGGTACTC AACATACAAC AGGTAACAAC
AACACACGTG CTTACTGTAT TCTAGAACTT GCTCTTGGTA ACATGGGTAA ATCAGGCGGC
GGTGCAAACA TCTTCCGTGG TCACGATAAC GTACAAGGTG CAACGGATTT AGGTGTTCTT
TCAGATACGC TTCCTGGCTA CTACGGTGTT GGTGAAGGCG CATGGAAACA CTGGTCAAAA
GTGTGGGATC TCGATTACGC ATGGGTTCAA AACCGATTCG ACCAAGGTAA ATACAACGGC
AAAACGCCAA TGAACAACTT TGGTATTCCT GTATCTCGTT GGGTTGATGG TGTTTTAGAA
GATAAAGCAA ACATCGAACA AAACGACAAT ATCCGCGCAA TGTTCTACTG GGGTCACGCA
GTAAACTCAC AAACACGTGG TACTGAGATC AGAAAAGCAA TGAGTAAGTT GGATATGATG
GTAATCGTCG ATCCATACCC AACCGTTGCC GCAGTAATGA ATGATCGTAC TGATGGCGTT
TACCTTCTTC CTGCGACAAC GCAGTTTGAA ACGCACGGTT CAGTAACGGC ATCAAACCGT
TCATTTCAAT GGCGTGAGCA AGTAATTCAA CCGTTGTTTG AATCAAAACC AGATCACGAG
ATCATGTACC TGCTGACTAA AAAGTTAGGG TACTCAGATC AACTGTTCAA ACACATCAAA
ATTGATGAGA ACAACCAACC TGTAATCGAA GACATCACAC GCGAATTTAA CCGTGGTATG
TGGACAATTG GTTACACAGG TCAAAGCCCT GAGCGTATTA AAGCGCACAC ACAAAACTGG
CACACGTTCC ACAAAACAAC GCTAGAAGCA GAAGGCGGCC CAGTTAATGG TGAAACCTAC
GGTCTTCCTT GGCCTTGTTG GGGCACGCCA GAAATGAAGC ACCCAGGTAC GCACATTCTT
TATGATACGT CGAAACCTGT TGCTCAAGGT GGCGGTAACT TCCGTACTCG TTTTGGTGTT
GAGTATGAAG GTCAAAGTCT ACTTGCTGAA GACAGCTACC CAGTAGGCTG TGAAATTGAA
GATGGTCACC CAGAATTCAC TGACAAACTG CTTAAGCAAC TTGGTTGGTG GGACGATCTG
ACTGCCGCTG AGAAAGTCGC AGCAGAAGGA AAAAACTGGA AAACTGACTT ATCTGGCGGT
ATTCAACGTG TTGCCATTAA ACACGGTTGT ATGCCATTTG GTAATGCAAA AGCACGTGCG
ATTGTATGGA CGTTCCCTGA CCGTGTTCCA CAACACCGTG AGCCGTTATA CACACCACGT
CGTGATTTGG TTGCTGATTA CCCAACATGG GATGATCGCG CGGCTAACTT CCGTATACCA
ACATTGTACA AAACAATTCA AGACCAAGAT AAGTCAAAAG AATACCCAAT TATTCTTACG
ACAGGTCGTC TTGTTGAGTA CGAAGGTGGT GGTGAAGAAA CACGTTCAAA CCCTTGGCTT
GCCGAGCTTC AACAAGAAAT GTTTGTTGAA GTAAACCCGA AAGACGCGAA TGACATTGGC
TTTAAAGACG GTGACATGGT GTGGGTTGAA GGCGCTGAAA GAGGTCGTAT TCACGTTAAA
GCTATGGTGA CACGTCGTGT GAAACCGGGC CTAGCGTTCT TACCATTCCA CTTCGGCGGT
AAATTCGAAG GAGAAGACTT ACGTGATAAG TACCCAGAAG GTACGGTTCC ATACGTTAGT
GGCGAAGCTG CAAACACAGC AACCACCTAT GGGTATGATC CTGTGACTCA AATGCAGGAA
ACGAAAGTAA CACTCTGTAA TATCACCAAA GCGTAA
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| Protein sequence | MKLTKRSDSV QKQENQLGIT RRMFMRTSTI AAGAVASASM FVSSMMRKAQ AQEVPVDAPT
EVKRTICSHC SVGCGIYAEV QNGVWTGQEP AFDHPFNAGG HCAKGAALRE HGHGERRLKY
PMKLENGKWK KLSWDEAIEE IGNKALEIRK ESGPDSVYWL GSAKHNNEQA YLYRKMASLW
GTNNVDHQAR ICHSTTVAGV ANTWGYGAMT NSFNDMHNCK SMLFIGSNPA EAHPVAMQHI
LIAKEKNGCK IVVADPRRTR TAAKADHYVS LRPGSDVAFI WGVLFHVFAN KWEDQEFINQ
RVFGMDEIRT EVAKWNPAEV ERVTGVTEAE VYETAKLLSE NRPGCVVWCM GGTQHTTGNN
NTRAYCILEL ALGNMGKSGG GANIFRGHDN VQGATDLGVL SDTLPGYYGV GEGAWKHWSK
VWDLDYAWVQ NRFDQGKYNG KTPMNNFGIP VSRWVDGVLE DKANIEQNDN IRAMFYWGHA
VNSQTRGTEI RKAMSKLDMM VIVDPYPTVA AVMNDRTDGV YLLPATTQFE THGSVTASNR
SFQWREQVIQ PLFESKPDHE IMYLLTKKLG YSDQLFKHIK IDENNQPVIE DITREFNRGM
WTIGYTGQSP ERIKAHTQNW HTFHKTTLEA EGGPVNGETY GLPWPCWGTP EMKHPGTHIL
YDTSKPVAQG GGNFRTRFGV EYEGQSLLAE DSYPVGCEIE DGHPEFTDKL LKQLGWWDDL
TAAEKVAAEG KNWKTDLSGG IQRVAIKHGC MPFGNAKARA IVWTFPDRVP QHREPLYTPR
RDLVADYPTW DDRAANFRIP TLYKTIQDQD KSKEYPIILT TGRLVEYEGG GEETRSNPWL
AELQQEMFVE VNPKDANDIG FKDGDMVWVE GAERGRIHVK AMVTRRVKPG LAFLPFHFGG
KFEGEDLRDK YPEGTVPYVS GEAANTATTY GYDPVTQMQE TKVTLCNITK A
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