| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1438 |
|---|
| Symbol | |
|---|
| ID | 6987093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 1552313 |
|---|
| End bp | 1553269 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643379786 |
|---|
| Product | putative allophanate hydrolase subunit 2 |
|---|
| Protein accession | YP_002262886 |
|---|
| Protein GI | 209694957 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
|---|
| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACTAC GAATTCACAG CACAGGGCCA TTGGCGCTAC TTCAAGACAA GGGTCGATAT
GGTCACCAAT CGGTAGGGGT GACTCCCGGC GGACCAATGG ATGAGCATGC GTTTGATTGG
GCTAATAAAT TAGTAGATAA CGATTCAAAT GCGACTCAAA TTGAAATCAC GTTAGGTCAA
TTTAGCTGTA CGTTTTATGC AGCCACCACA ATCGCACTGA CCGGTGCGGA TATGGGAGCG
AAACTCAATG GTGATGCGAT CAGTCCTTGG CAAAGTTACG CGATAAATTC AGGTGATAAA
CTTGAAATGA GCATCGCAAA GTCGGGGCTA CGTGCTTATT TAGCGGTAAG TGGTGGGTTT
AAAGTTGAAA CGATTTTAGG CAGTTCCGCC ACGGTAAGTC GTGATGGATT AGGTGGCGAT
GATGGTAAAG GCAGTGCATT AATCCCAAAT CGTTTAATTC GTTATTCGGT TGATGTTTCG
CAATTATCTG CGTCTTTTTC TGAGCCGAGA TTGCGTAAGC AAGTGCCGAG TCGATTTATT
CCGACGTACG ATCGCCATAT TAATATCGGA GTGATCCCGA GCTATCAATA TAACGATTTT
TCGATTGCCG ATCGTCAGCG ATTTTTTTCG TCAATTTATA CCGTTTCGAC CAACATTGAT
CGCATGGGGT ATCGCTTATC TGGTGAACCT ATTCATTGTA AGCGTAATAA TTTAATTTCT
GAAGGCATAG CACTTGGATC AATTCAAATC CCGAGTGATG GCCAACCTAT TGTGCTAATG
CGTGATCGTC AAACCATCGG GGGATACCCA AAAATAGGGT GCGTAGTGCA TGCGGATATT
AATCGTTTAG CGCAATGCTT ACCGGGTTCA ACCGTTCAGT TTTATGAGAA AGAACTCTAC
AGCGCAGAAG CTGAATTGAT GATACAACGT CAATTCTTTA CGTCTTATTG CTCTTAA
|
|---|
| Protein sequence | MTLRIHSTGP LALLQDKGRY GHQSVGVTPG GPMDEHAFDW ANKLVDNDSN ATQIEITLGQ
FSCTFYAATT IALTGADMGA KLNGDAISPW QSYAINSGDK LEMSIAKSGL RAYLAVSGGF
KVETILGSSA TVSRDGLGGD DGKGSALIPN RLIRYSVDVS QLSASFSEPR LRKQVPSRFI
PTYDRHINIG VIPSYQYNDF SIADRQRFFS SIYTVSTNID RMGYRLSGEP IHCKRNNLIS
EGIALGSIQI PSDGQPIVLM RDRQTIGGYP KIGCVVHADI NRLAQCLPGS TVQFYEKELY
SAEAELMIQR QFFTSYCS
|
|---|
| |