Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1406 |
Symbol | |
ID | 6987062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1523086 |
End bp | 1523517 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643379759 |
Product | membrane protein |
Protein accession | YP_002262859 |
Protein GI | 209694930 |
COG category | [S] Function unknown |
COG ID | [COG4125] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAACAA GATTTGACCG TATTCGCCAT GCTATTTTAT TCGAGATTAT TGGCCTAGTT ATTATTGTTG GCGTATTAAG TCAGCTTGGT TTCAATATGG GGCATGTTGG AGTGATGGGC GTAATTTTCT CCATAATAGC AACAGGTTGG AACTATGTTT ACAACATTGG CTTTGATAAT TACCTTGTAA AAAAAACGGG GTCGGCAGTA AAAACGGCAT GGATACGAAT CGTTCATAGC TTAGGTTTTG AGGGGGGACT TCTTTTCTTA ACCATTCCGT TTATGGCGTG GTTTTTAAAC CTAACAATAT GGGATGCTTT TGTGCTCGAT ATTGGAATGG TGATTTTCTA TCTATTTTAT GCCTATATTT ATAATTTTAT TTATGACACT ATTTTTCCGG TGAATGCGGA GAGGGTAATC TCTAAATCGT AG
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Protein sequence | MRTRFDRIRH AILFEIIGLV IIVGVLSQLG FNMGHVGVMG VIFSIIATGW NYVYNIGFDN YLVKKTGSAV KTAWIRIVHS LGFEGGLLFL TIPFMAWFLN LTIWDAFVLD IGMVIFYLFY AYIYNFIYDT IFPVNAERVI SKS
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