Gene VSAL_I1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1406 
Symbol 
ID6987062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1523086 
End bp1523517 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content37% 
IMG OID643379759 
Productmembrane protein 
Protein accessionYP_002262859 
Protein GI209694930 
COG category[S] Function unknown 
COG ID[COG4125] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACAA GATTTGACCG TATTCGCCAT GCTATTTTAT TCGAGATTAT TGGCCTAGTT 
ATTATTGTTG GCGTATTAAG TCAGCTTGGT TTCAATATGG GGCATGTTGG AGTGATGGGC
GTAATTTTCT CCATAATAGC AACAGGTTGG AACTATGTTT ACAACATTGG CTTTGATAAT
TACCTTGTAA AAAAAACGGG GTCGGCAGTA AAAACGGCAT GGATACGAAT CGTTCATAGC
TTAGGTTTTG AGGGGGGACT TCTTTTCTTA ACCATTCCGT TTATGGCGTG GTTTTTAAAC
CTAACAATAT GGGATGCTTT TGTGCTCGAT ATTGGAATGG TGATTTTCTA TCTATTTTAT
GCCTATATTT ATAATTTTAT TTATGACACT ATTTTTCCGG TGAATGCGGA GAGGGTAATC
TCTAAATCGT AG
 
Protein sequence
MRTRFDRIRH AILFEIIGLV IIVGVLSQLG FNMGHVGVMG VIFSIIATGW NYVYNIGFDN 
YLVKKTGSAV KTAWIRIVHS LGFEGGLLFL TIPFMAWFLN LTIWDAFVLD IGMVIFYLFY
AYIYNFIYDT IFPVNAERVI SKS