| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1391 |
|---|
| Symbol | |
|---|
| ID | 6987051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 1507476 |
|---|
| End bp | 1508219 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643379746 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002262845 |
|---|
| Protein GI | 209694917 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3148] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.046419 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTC ACTCAGTTCA TCAATTACAC AAAGAAAGAC TAGCTCGCTC CACAAAACCC
TTTAATGCGC GTGGTGGAAA TGTGGATCGT TGTGAATTTT GCCAAGTACG TAAAGATTAT
TGTATTTGTG AATATCAGCC GCAAGCAGCA TCAAAGGCGG CTTTTTTATT AATCATGTTT
GATACCGAAG TGCTTAAACC AAGTAATACG GGGAAATTGA TTGCTGATGT TATTCCTGAT
ACTCACGCTT ATCTTTGGTC CCGCACTGAA CCAAACCCTG AATTATTAGC ACTATTGAAA
GACGAATCTT ATCAACCTTT TGTTATTTTT CCTGAAGAGT TAATCGAAAA TAAGAGCTTA
GTGAGAAATG ATATTGTGGT TGAAGAGGGG AAAACTCCGT TATTTATTCT TCTTGATGGT
AGTTGGCGTG AAGCTGGGCG TATGTATCGT AAAAGTGTGT ATTTACATCA TTTGCCTGTC
TTGTCGTTTA ACCGTGAGCA CCTTTCTAAT TACATCATGC GTAAAGCAAC GAAAGATCAT
CAATTAGCGA CAGCTGAAGT GGCCAGTTTG GTATTGGATT TATTGGGTGA AAAAGAGAAT
GCAAAGCACC TTGAGTGTTG GTTTGATTTA TTTCGAGAGC ATTATCTTTA CAGTAAACGT
CCAGTGAAAG GTGCAGAAAG AGGAATGGGC CTAAAACGCT TGATTGAATT TCGTACAGAA
CTGAAAGTTA ATAACTTAAT CTAA
|
|---|
| Protein sequence | MRIHSVHQLH KERLARSTKP FNARGGNVDR CEFCQVRKDY CICEYQPQAA SKAAFLLIMF
DTEVLKPSNT GKLIADVIPD THAYLWSRTE PNPELLALLK DESYQPFVIF PEELIENKSL
VRNDIVVEEG KTPLFILLDG SWREAGRMYR KSVYLHHLPV LSFNREHLSN YIMRKATKDH
QLATAEVASL VLDLLGEKEN AKHLECWFDL FREHYLYSKR PVKGAERGMG LKRLIEFRTE
LKVNNLI
|
|---|
| |