Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1387 |
Symbol | |
ID | 6987048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1503335 |
End bp | 1503823 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643379742 |
Product | putative lipoprotein |
Protein accession | YP_002262841 |
Protein GI | 209694913 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0376898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCGCA ATATCTCTTT AATCTTTGGC TTTATCCTAT TAAGTAGCAT CGCAGGCTGT AGCTCTACGC CACCCTCCCA ACAATTATCG AAACAAGATA TTGAAGTTAA ATACCCACAG TTGAAGCAAT CCGATGGCTA TCAAGATTAT TTTCGAGAAT GGCAAGGCGT CCCTTATAAA TACGGTGGAA TAAGTAAAGA TGGTGTGGAT TGCTCAGCTT TTACTCAAGA CGCACTTCAA ACATTACATC AATTATCTTT ACCTAGAACG ACTGAGTATC AAATATCAAC GGGGCAGAAA ATTGCGCTCG TAAATGCAAA GAAAGGCGAT CTTATTTTCT TTAAAACAGG AATAAAAGTA AGACATGTAG GTGTGTATAT TGGAAACCGT GAATTCATGC ATGCTTCAAC ATCAAAAGGC GTCATTATCT CAAGTCTTGA TAATCCATAT TGGAAAAAAG CGTATTGGCA AGCAAGGCGA GTGTTGTAA
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Protein sequence | MTRNISLIFG FILLSSIAGC SSTPPSQQLS KQDIEVKYPQ LKQSDGYQDY FREWQGVPYK YGGISKDGVD CSAFTQDALQ TLHQLSLPRT TEYQISTGQK IALVNAKKGD LIFFKTGIKV RHVGVYIGNR EFMHASTSKG VIISSLDNPY WKKAYWQARR VL
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