Gene VSAL_I1383 details

Gene Information

• Locus tag: VSAL_I1383
• Symbol: ribE
• ID: 6988901
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1500753
• End bp: 1501364
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643379738
• Product: riboflavin synthase subunit alpha
• Protein accession: YP_002262837
• Protein GI: 209694909
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.850296
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACTG GGATTGTAGC AACGACGGCA AAGGTTATTG ATATCATTAA AAAAGAGAAC 
TTTCAGACTC ATATTGTTGA AATTCTTGAA CCTTACAATC ATGAATTAGA AATAGGGGCT 
TCTGTTGCTC ATAACGGGTG CTGTTTGACG GTGACTAAAA TTGATGGCAA CAAAGTCTGG 
TTTGATTTGA TTGAAGAAAC GTTACGTTTA ACCAACCTTG GTTTCTTAAG TATTGGGCAA 
CGAGTCAATA TTGAGCGTGC CGCTCGGTTT GGTGATGAGA TTGGTGGTCA TTCAATGTCA 
GGTCATATTG TTGATATTAT GATCGTAAGG GAAGTGATTA AAACCCCCGC GAACTGTAAA 
ATTTGGTTTG ATGTTCCACC TACATGGCTC AAATATGTGT TACATAAAGG GTATGTTGGT 
GTCGATGGAA TTAGTCTTAC GATTGGTGAC GTTGATGCAA AGGGATTTAA CGTGAATCTT 
ATCCCTGAAA CTCTAGAGAG AACGAATTTA AGTGAGCGTA TTGTGGGTGA TAAAATTAAT 
TTAGAAATTG ATCCGCAAAC CCAAGCTATT GTCGATACGA TTGAGCGAGT ATTAGCGAAC 
CAAAATAATT AA 

 

Protein sequence

MFTGIVATTA KVIDIIKKEN FQTHIVEILE PYNHELEIGA SVAHNGCCLT VTKIDGNKVW 
FDLIEETLRL TNLGFLSIGQ RVNIERAARF GDEIGGHSMS GHIVDIMIVR EVIKTPANCK 
IWFDVPPTWL KYVLHKGYVG VDGISLTIGD VDAKGFNVNL IPETLERTNL SERIVGDKIN 
LEIDPQTQAI VDTIERVLAN QNN