| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1382 |
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| Symbol | norM |
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| ID | 6987045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1499112 |
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| End bp | 1500494 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379737 |
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| Product | multidrug efflux protein |
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| Protein accession | YP_002262836 |
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| Protein GI | 209694908 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.13512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCACAGAT ACCAAAAAGA AATCGTTCGC TTAATCAAGC TATCTACCCC TGTTCTAATT
GCGAGTGTTG CTCAAACAGG CATGGGGTTT GTCGATACAG TAATGGCAGG TGGCGTAAGT
GCTACCGACA TGGCAGCCGT TGCGATTGCA GCCAGTGTTT GGCTGCCTGC TATATTATTT
GGTGTTGGTT TACTAATGGC ACTTGTGCCT GTTGTTGCTC AACTGAATGG TTCAGGAAAA
TCGAAAAAAA TTCCTTTTGA GATCCATCAG GGCATTTATT TAGCCCTACT GATCTCTATT
CCTATTATGG TTATCCTTTA CAACGCCGGA CATATCATTG CATTAATGAA TGTTGAGCCT
GAGTTATATG AAAAAACTAA AGGTTACTTA CACGCCGTAT TGTGGGCCGC ACCTGCGTTT
TTATTATTCC AAGCATTGCG CAGTTTCTGC GAAGGTTTGT CATTAACGAT ACCTGCAATG
GTCATTGGTT TTATCGGTCT TGCCGCTAAC ATCCCTCTAA ACTGGATGTT TGTATATGGC
AAGCTTGGTG CCCCTCCCCT AGGTGGTGTT GGTTGTGGTA TTGCAACCGC TATTGTCTAC
TGGCTGATGT TTGTTGCGAT GATCATTTAT ACGTTTGTAG CGCCAAAGCT ACGCCGCGTA
AACTTATATG AAAACTGGAA CAAACCACAA CTAAAAGAAA TCTATCGCTT ATTTAAGCTG
GGTCTTCCTG TTGCCTTGTC TATTTTCTTT GAAGTAACCT TATTTGCAGC GGTTGCTCTA
TTGGTTTCCC CATTAGGCTC TACCGTTGTT GCTGCCCATC AGGTGGCGAT TAACTTCTCT
TCATTGATCT TTATGGTGCC AATGAGCATT GCGATTGCAG TAAGTATTCG CGTAGGTCAA
AAATTAGGTG AAAATGATCT TGAAGGAGCA CGAATTGCAA GCTATTGCGG TTTGGCTTTT
GGTCTATTAA TGGCATTTTG TACCGCTATT TTAACCGTAC TTTTTCGCGA ATCTATTGCT
TATTTATACA CAGACAACGT CGAAGTAGTA CATCTCGCGG TAAGCTTAAT GTTATTGGCT
GCGGTTTACC AATGTACTGA TGCAGTGCAA GTTGTTGCTG CTGGTGCATT GCGTGGCTAT
AAAGACATGA CAGCAATCTT TAAACGTACG TTTATCTCTT ATTGGATTGT CGGTTTGCCT
GCGGGATACA TTCTAGGCAT GACGGATTGG ATCGTTGAGC CTATGGGTGT TTACGGTTTC
TGGATTGGCT TTATTGGTGG TTTAAGTACC GCTGCTATCC TATTAAGCTT ACGTTTACGT
TGGCTACAGA AAAACCCACA ACACATCAAT ATGGAAGTCG ATGAATTGCA AGTAATGCAT
TAA
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| Protein sequence | MHRYQKEIVR LIKLSTPVLI ASVAQTGMGF VDTVMAGGVS ATDMAAVAIA ASVWLPAILF
GVGLLMALVP VVAQLNGSGK SKKIPFEIHQ GIYLALLISI PIMVILYNAG HIIALMNVEP
ELYEKTKGYL HAVLWAAPAF LLFQALRSFC EGLSLTIPAM VIGFIGLAAN IPLNWMFVYG
KLGAPPLGGV GCGIATAIVY WLMFVAMIIY TFVAPKLRRV NLYENWNKPQ LKEIYRLFKL
GLPVALSIFF EVTLFAAVAL LVSPLGSTVV AAHQVAINFS SLIFMVPMSI AIAVSIRVGQ
KLGENDLEGA RIASYCGLAF GLLMAFCTAI LTVLFRESIA YLYTDNVEVV HLAVSLMLLA
AVYQCTDAVQ VVAAGALRGY KDMTAIFKRT FISYWIVGLP AGYILGMTDW IVEPMGVYGF
WIGFIGGLST AAILLSLRLR WLQKNPQHIN MEVDELQVMH
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