| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1374 |
|---|
| Symbol | |
|---|
| ID | 6987037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 1494709 |
|---|
| End bp | 1495161 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643379730 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002262829 |
|---|
| Protein GI | 209694901 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3304] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.422006 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAA TTGGTAATTT AATCTGGTTT CTGTTTGGTG GCGTGTTTAT GGGTTTAGCA
TGGTGCTTTT TTGGGCTTAT CGCTTTTATC AGCATTATTG GAATCCCTTG GGGAAGAGCG
TGTTTTGTTA TCGCGGGCTT TTCATTTTTT CCTTTCGGTA AAGAAGCGAT CCGTCGTGAT
GATTTAACGA AATCTGAAGA TATAGGAACG GGTAGCCTTG GTTTTTTAGG TAATGTTCTG
TGGTTTATTT TTGCTGGCTT CTGGTTGGCG ATTGGTCATG TAATATCGGC AATTGCTTGC
TTTGTTACTA TCATTGGTAT TCCATTTGCG ATACAGCATT TAAAACTTGC TGCTATTTCA
ATTGCACCGA TCGGTCAGAC TATCGTTGAT AAAGAAGTGG CTTCTGTAGT TCGCAATGCG
AATGCAAAAA TAGAAGCGGA TAAGTGGAAG TAA
|
|---|
| Protein sequence | MSAIGNLIWF LFGGVFMGLA WCFFGLIAFI SIIGIPWGRA CFVIAGFSFF PFGKEAIRRD
DLTKSEDIGT GSLGFLGNVL WFIFAGFWLA IGHVISAIAC FVTIIGIPFA IQHLKLAAIS
IAPIGQTIVD KEVASVVRNA NAKIEADKWK
|
|---|
| |