Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1372 |
Symbol | rbsD |
ID | 6989067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1493673 |
End bp | 1494092 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643379728 |
Product | D-ribose pyranase |
Protein accession | YP_002262827 |
Protein GI | 209694899 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA ACACACTATT AAATGCTGAA TTATCGTACA TAATTGCCTC TCTAGGCCAT ACCGATGAAA TTACAATTTG TGATGCTGGC TTACCTATTC CAGACAGATC ACAACGAATC GATTTAGCGT TAATTCAGGG GATACCAACC TTCATTGATA CCGTAAAAGC AACGCTTGCT GAGATGCAAA TTGAAGGCGT AATTGTTGCC CAAGAATTCA AAACCGTTAG CCCACAATTG CATGATGAGC TAATGACTCT TGTCCAAATC GAAGAAGAAT TACGCGGTAA ACCAATCACG ATTTCTTATA TCCCTCACGA AGAATTCAAA TCACATTCTC ACCAGAGTAA AGCGATAGTT CGTACTGGTG AATGCACTCC TTACGCGAAT GTTATTTTTC AATCTGGAGT TGTTTTTTAA
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Protein sequence | MKKNTLLNAE LSYIIASLGH TDEITICDAG LPIPDRSQRI DLALIQGIPT FIDTVKATLA EMQIEGVIVA QEFKTVSPQL HDELMTLVQI EEELRGKPIT ISYIPHEEFK SHSHQSKAIV RTGECTPYAN VIFQSGVVF
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