| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1370 |
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| Symbol | rbsC |
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| ID | 6989068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1491115 |
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| End bp | 1492086 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643379726 |
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| Product | ribose ABC transporter permease protein |
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| Protein accession | YP_002262825 |
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| Protein GI | 209694897 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.512196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTCCAT CTGAATCGCA AAAAAAGAAA GGCGGCATGT TCTCAAAAGA ATGGCTGATT
GAGCAAAAAT CGTTAATCGC ACTATTGCTA CTCATTGTCG TGGTTTCTTT TTTAAACGAC
AACTTTTTTA CTGTCGACAA TATTCTAAAT ATCTTACGTC AAACCTCGGT AAACGCGATC
ATCGCAGTTG GTATGACATT AGTTATTTTG ACCGCTGGCA TTGATTTGAG TGTTGGCTCA
GTATTGGCGC TTTGTGGTGC CTTTGCCGCT ACGATGATTG GCCTTGAGAT CCACCCAATC
ATTGCGGTTC CGACCTCTTT ACTTGCAGGT GCTATTCTTG GTGCGATTAG CGGAATTATC
ATTGCCAAAG GTAAAGTTCA AGCCTTTATC GCAACGCTGG TAACGATGAC GTTGCTTCGT
GGTGTAACCA TGGTTTACAC AGAAGGCCGC CCTATCTCTA CTGGCTTTAC TGATGTTGCT
GATAGCTTTT CATGGTTCGG TACGGGTTAT GCACTTGGTA TCCCAGTTCC AATCTGGTTA
ATGGTTATCG TGTTCGCATC GGTATGGTAC TTATTAAATC ACACACGCTT TGGTCGCTAT
GTTTACGCGC TAGGTGGCAA TGAATCGGCA ACACGTTTAT CGGGCATCAA TGTTGATCGC
GTTAAGATCG GTGTTTATGC TATCTGTGGT CTACTTGCTG CTTTGGCTGG CTTAATCGTA
ACGTCTCGTC TTTCTTCTGC TCAACCAACC GCGGGTATGG GTTATGAGTT AGATGCTATC
GCTGCGGTTG TTCTTGGTGG AACAAGCCTT GCTGGTGGTA AAGGTCGTAT TATGGGTACG
CTTGTTGGTG CTTTGATTAT CGGCTTCTTG AACAACGCAC TTAACTTATT AGATGTATCG
TCTTACTACC AAATGATCGC AAAAGCCGTG GTTATCTTAC TGGCCGTATT AGTCGATAAT
AAAAACAAAT AA
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| Protein sequence | MTPSESQKKK GGMFSKEWLI EQKSLIALLL LIVVVSFLND NFFTVDNILN ILRQTSVNAI
IAVGMTLVIL TAGIDLSVGS VLALCGAFAA TMIGLEIHPI IAVPTSLLAG AILGAISGII
IAKGKVQAFI ATLVTMTLLR GVTMVYTEGR PISTGFTDVA DSFSWFGTGY ALGIPVPIWL
MVIVFASVWY LLNHTRFGRY VYALGGNESA TRLSGINVDR VKIGVYAICG LLAALAGLIV
TSRLSSAQPT AGMGYELDAI AAVVLGGTSL AGGKGRIMGT LVGALIIGFL NNALNLLDVS
SYYQMIAKAV VILLAVLVDN KNK
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