Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1368 |
Symbol | rbsK |
ID | 6989072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1489002 |
End bp | 1489919 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643379724 |
Product | ribokinase |
Protein accession | YP_002262823 |
Protein GI | 209694895 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.176905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TAGTTGTTTT AGGTAGCGTA AATGCAGATC ACGTTCTACA AGTGGCTTCT TTCCCTCGTC CGGGCGAGAC GTTACACGGT CACAGCTATT CCGTTATTCC TGGTGGTAAA GGCGCAAACC AAGCGGTTGC TGCCGCGCGA TTAGGCGCAG ATGTTGCTTT TATTGCCAGT GTTGGTGATG ACAATTTTGG TCAACAAATG ATTGAAGCAT TCAAGTTTGA TGGCATTAAT ACCGAAGCGG TAATGATCGA AGAGAACACC CCAACAGGTA TCGCGATGAT CCAAGTCGCA GCAACGGGCG AAAACAGCAT TTGTATTTCA GCAGAAGCAA ACGCACGTTT AACCGCAGAA CGCATTGCAC CTCATCATGG TTTAATTGAA GCGGCTGATA CCTTATTAAT GCAACTTGAA ACCCCTATTG AAACCATCGA AAAAGCAGCA CAAATTGCAA AAGCGGCCGG AACGAAAGTC GTATTAAACC CAGCCCCTGC TCAGCAATTA AGTGATGACT TATTACAACT TGTTGATATG ATTACGCCAA ATGAAACTGA AGCCGAATTA TTAACAGGCA TTGAAGTAAC GGATATGGCA AGCGCACAAC GCGCAGCAGA TGCGCTTCAT GCAAAAGGCA TTGAAACCGT GATGATCACC CTAGGTAGCA AAGGTGTGTG GATCAGTAAA AATGGCAAAG GCCGTCAAGT GGAAGGCTTT AGAGTACAAG CTACCGACAC CACAGGCGCA GGCGATACCT TCAATGGTGC ATTTTTAACT GGCCTACAGT CTGGTCGTAA ATTGGATGAT GCGATTAAAT TCGCTCACGC GGCAGCGGCA ATTTCAGTAA CACGAATGGG TGCTCAAACC TCTATTCCTT CTATCACCGA AGTAGAGCGT TTTCTATTAG AGCATTGA
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Protein sequence | MNKLVVLGSV NADHVLQVAS FPRPGETLHG HSYSVIPGGK GANQAVAAAR LGADVAFIAS VGDDNFGQQM IEAFKFDGIN TEAVMIEENT PTGIAMIQVA ATGENSICIS AEANARLTAE RIAPHHGLIE AADTLLMQLE TPIETIEKAA QIAKAAGTKV VLNPAPAQQL SDDLLQLVDM ITPNETEAEL LTGIEVTDMA SAQRAADALH AKGIETVMIT LGSKGVWISK NGKGRQVEGF RVQATDTTGA GDTFNGAFLT GLQSGRKLDD AIKFAHAAAA ISVTRMGAQT SIPSITEVER FLLEH
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