Gene VSAL_I1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1366 
Symbol 
ID6987035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1487015 
End bp1487869 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content41% 
IMG OID643379722 
ProductDNA ligase 
Protein accessionYP_002262821 
Protein GI209694893 
COG category[L] Replication, recombination and repair 
COG ID[COG1793] ATP-dependent DNA ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.332373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAT CAACATTATC GACACTCATT GGCATCGGAT TGTTCTCTGC TCCCATGCTT 
GCTTTTGATA AATCTAATAC AGTCCCTGTT TCTGTATTGT TGGCAACAAG CTATGAAGAA
GGGATAGAGG TTGATAAATA TTGGGTCAGT GAAAAGCTCG ATGGAATAAG AGCGTATTGG
ACGGGGTCAG AGTTACTTAC TCGTAAAGGT CATAAAATCA TGGCACCCGA TTGGTTTATT
GCGCCGCTTC CTAAGCACGC GATTGATGGT GAATTATGGG CCGGACGTGG TGGTTTTCAG
CAAGTAGCGA GTACCGTATT AGATAGCCAA CCTGATGATG AGTTATGGGC CGAAATTACG
TTCATGATGT TTGATATTCC TCATTCTATT GGTATGTTTC CTCAGCGTTA TTCTGACTTA
TCATTATTGG TGCAAGGCCT AGCAACTCCC CACCTTAAAT TAGTAGAACA CCACCCAATT
AGCAGTGAAG ATGATTTACT CAAATCCCTT GAAGAGATGG CAGTGAATAA AGGCGAAGGC
TTAATGCTAA GAAAACTCGA TTCTATTTAT CGAGCGGGCA GAAGTGATGA TCTGATCAAG
TTAAAAAAAC ACTATGATGA TGAAGCGATT ATTGTGGGTT ATACCGATGG AAAAGGTAAA
TTTGAAGGGA TGGTCGGGGC GTTAATATTG CAAATGCCAA ATGGACAAGA GTTTAAGATT
GGCAGTGGAT TAAGCAATGA AGTGCGAGAA AACCCACCAA TATTAGGGCA GCAAGTGACT
TATCGTTATA ATGGCTTTAC GGACAGTGGT ATTCCTAAGT TTGCGCGATA TATTGCGGTT
CGTGAAAAAT ATTAA
 
Protein sequence
MKVSTLSTLI GIGLFSAPML AFDKSNTVPV SVLLATSYEE GIEVDKYWVS EKLDGIRAYW 
TGSELLTRKG HKIMAPDWFI APLPKHAIDG ELWAGRGGFQ QVASTVLDSQ PDDELWAEIT
FMMFDIPHSI GMFPQRYSDL SLLVQGLATP HLKLVEHHPI SSEDDLLKSL EEMAVNKGEG
LMLRKLDSIY RAGRSDDLIK LKKHYDDEAI IVGYTDGKGK FEGMVGALIL QMPNGQEFKI
GSGLSNEVRE NPPILGQQVT YRYNGFTDSG IPKFARYIAV REKY