Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1366 |
Symbol | |
ID | 6987035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1487015 |
End bp | 1487869 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643379722 |
Product | DNA ligase |
Protein accession | YP_002262821 |
Protein GI | 209694893 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.332373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAT CAACATTATC GACACTCATT GGCATCGGAT TGTTCTCTGC TCCCATGCTT GCTTTTGATA AATCTAATAC AGTCCCTGTT TCTGTATTGT TGGCAACAAG CTATGAAGAA GGGATAGAGG TTGATAAATA TTGGGTCAGT GAAAAGCTCG ATGGAATAAG AGCGTATTGG ACGGGGTCAG AGTTACTTAC TCGTAAAGGT CATAAAATCA TGGCACCCGA TTGGTTTATT GCGCCGCTTC CTAAGCACGC GATTGATGGT GAATTATGGG CCGGACGTGG TGGTTTTCAG CAAGTAGCGA GTACCGTATT AGATAGCCAA CCTGATGATG AGTTATGGGC CGAAATTACG TTCATGATGT TTGATATTCC TCATTCTATT GGTATGTTTC CTCAGCGTTA TTCTGACTTA TCATTATTGG TGCAAGGCCT AGCAACTCCC CACCTTAAAT TAGTAGAACA CCACCCAATT AGCAGTGAAG ATGATTTACT CAAATCCCTT GAAGAGATGG CAGTGAATAA AGGCGAAGGC TTAATGCTAA GAAAACTCGA TTCTATTTAT CGAGCGGGCA GAAGTGATGA TCTGATCAAG TTAAAAAAAC ACTATGATGA TGAAGCGATT ATTGTGGGTT ATACCGATGG AAAAGGTAAA TTTGAAGGGA TGGTCGGGGC GTTAATATTG CAAATGCCAA ATGGACAAGA GTTTAAGATT GGCAGTGGAT TAAGCAATGA AGTGCGAGAA AACCCACCAA TATTAGGGCA GCAAGTGACT TATCGTTATA ATGGCTTTAC GGACAGTGGT ATTCCTAAGT TTGCGCGATA TATTGCGGTT CGTGAAAAAT ATTAA
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Protein sequence | MKVSTLSTLI GIGLFSAPML AFDKSNTVPV SVLLATSYEE GIEVDKYWVS EKLDGIRAYW TGSELLTRKG HKIMAPDWFI APLPKHAIDG ELWAGRGGFQ QVASTVLDSQ PDDELWAEIT FMMFDIPHSI GMFPQRYSDL SLLVQGLATP HLKLVEHHPI SSEDDLLKSL EEMAVNKGEG LMLRKLDSIY RAGRSDDLIK LKKHYDDEAI IVGYTDGKGK FEGMVGALIL QMPNGQEFKI GSGLSNEVRE NPPILGQQVT YRYNGFTDSG IPKFARYIAV REKY
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