| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1358 |
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| Symbol | |
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| ID | 6988677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1475814 |
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| End bp | 1478078 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643379716 |
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| Product | VgrG preotein, VgrG-2 |
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| Protein accession | YP_002262815 |
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| Protein GI | 209694887 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAATG AGGTCGAGTT TAAGTTTGAA GTCCTTGGCA CGAATCATGA ATTTCGTGTT
GAGAGTTTCA ATGTGGTCGA AGAGGTATCC CAACCTTTTA AAATAACCTT GTCGTTATTG
TCATTAGACC CTGATATAGC GTTTGATGTA TTAAGCCGAA AACCCGCATT ATTAACCGTT
CTTGGGCAAG GAATGAATGC CGGACGATTA TTTCATGGTG TCGTAAATGA AGTTCGGTAT
TTAGGCGCAG GTCGTCGTTT CTCTCATTAT CAAATTACGC TCGTACCTCA ACTGTGGTTT
TTAACCCAAC GCCAAGATTG TCGTATTTTC CAAGATAAGT CGATTGTTGA TATTTTAACT
GAAGTGCTCG ATGGGGCGTC AGTGACTGAT TATCGCTTTG AACTGTCTAA TACCTATCCC
AACCAAGAAT ACTTACTTCA ATATCGTGAA ACTGACAGTC ATTTTGTTCA GCGTTTATTA
GCAGAGCACG GTTTATGGTA TTACTTCGAA CATACTACAA GTAACCATAG CATGGTGATT
ATTGATAAAA ATGATGCCAT TCCAGAGTTA ATTAGTACTC CTCTAAACGC GTCTTATATT
GGCCCTTTGG TGTACCAATC TGAAGGAGGT GGTAATGCTG ACAGAGAGCA TATATTTGAG
TTAAGCAGCT ATAACCGTGT TCGTACTGGT CATGTAATTC AAACCGATTA TAACTACGAT
CAACCCCGCA TCCCACAACA AGTGCAACAA CAGGGTGATC GAGATACTGA TTTAGCATTC
TTTGATTACC CAGGACGCTA TGGGGAAAGC GTAGAAGGCC AACAACGTAG CAATTACCTT
ATCGCTGATC ATCAGGTTGA AAATCATCAA ATTGAAGCCG AAAGTAACAT TATGCGTTTA
ACTGCTGGTT ATAGTTTTGA TTTGGCAAAG CACCCAAGAA ACGCAATCAA TCGAGATTAC
ACGCTCACAG CGATAACGCA CAGTGGTTAT AACCCACAAG TGCACGAAGA AGAATCAAGT
GGTCTGCCGA CGACGTATCA AAACTATTTT AATTGTATTC CTCGCGATGT TGGCTATAAA
GCACCTAAAT TAGCCGCCCC AGTGGTTGAT GGCCCTCAGA CGGCAGTCGT GGTTGGCCCC
GCAGGAGAAG AAATATATAC CGATCCAATG GGACGTATTA AAGTCCAATT TCACTGGGAT
CGTTATGGTA ACAACGATGA GCATTCAGGT TGTTGGCTTC GTGTTAGTCA ATCGATGGCC
GCGCCAACGT GGGGCGCGGT GTATTTACCG AGAATAGGGC ACGAAGTGGT GGTGACCTTC
TTAGAGGGAG ATCCAGACAG ACCCTTAGTG ACAGGTGCGG TATACAACGG CTTACACACG
CCCCCTTATG CCTTGCCAGA GCATAAAACC AAAACGGTAT TTCGGACTCA AACCCACAAA
GGGGAAGGGT ACAACGAAAT GTCGTTTGAA GACGAAGCCA ATCAAGAAGA AGTTTATTTT
CATGCTCAGA AAGACATGAG AACTAAGGTT CTAAATAACC GATTCAGAAC CATAGGGAAT
GATGAAGAGT TAGAAGTTGG ACGTAACCAA GAAAACATCA TTAACAAAGA CAGAAAAGAA
ACCATAGAAG GCCATAAAAC ATCAATAACA AACCAAACCT TCTCAGAAAC CGTCGAGCAA
GACGTAACGG TTAAATACAA CGCCAACATA GAAAAGAGCG TGGCTGTTGA ACAGACGTTG
ACAATCTACG AAAACCGACA GAGTACGATA GGTAAGAACG ACGAACTCAC GATTAAAGGC
GAACAAAGCC GCATTACTAT GGGAGCAAGT AGCAGTGATA TTAGCGCTGA CGATACGCTA
ACCGTTGGTC AGAATCTCAC AATAGAAGTC GGAAATAATG CATCCATTAA ATCGGATGCT
GACCATACCA TAATCAGTGC CGATGAAATT ACGGCTCAGG TGGGAAGCTC GGGTTTTATT
CTAAAAAATA ACGGCACCAT TACCTTGTAT GGCTCAGATA TTACGGTTGA TGGCTCTGGC
TCGGTCGCCT TGGTTGGGGG AAATGTTGCG ATTAACCCTG GCGCAGCATC TAGTCAAAGT
AGCAGTGTAA GCGCGAACCT TCCTCGTACC TTCTCAATGT CACCATTAGC ATCAACCAAA
CCAGTGATGA ATTCAGCGGC GTACAGTGAA ATGGTTGAAG ATGGCGCATT AATGAAAGAG
TTATGCCAAT GTGGTAAGGA GGGCATATGC AAGCTGCACA GCTAA
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| Protein sequence | MANEVEFKFE VLGTNHEFRV ESFNVVEEVS QPFKITLSLL SLDPDIAFDV LSRKPALLTV
LGQGMNAGRL FHGVVNEVRY LGAGRRFSHY QITLVPQLWF LTQRQDCRIF QDKSIVDILT
EVLDGASVTD YRFELSNTYP NQEYLLQYRE TDSHFVQRLL AEHGLWYYFE HTTSNHSMVI
IDKNDAIPEL ISTPLNASYI GPLVYQSEGG GNADREHIFE LSSYNRVRTG HVIQTDYNYD
QPRIPQQVQQ QGDRDTDLAF FDYPGRYGES VEGQQRSNYL IADHQVENHQ IEAESNIMRL
TAGYSFDLAK HPRNAINRDY TLTAITHSGY NPQVHEEESS GLPTTYQNYF NCIPRDVGYK
APKLAAPVVD GPQTAVVVGP AGEEIYTDPM GRIKVQFHWD RYGNNDEHSG CWLRVSQSMA
APTWGAVYLP RIGHEVVVTF LEGDPDRPLV TGAVYNGLHT PPYALPEHKT KTVFRTQTHK
GEGYNEMSFE DEANQEEVYF HAQKDMRTKV LNNRFRTIGN DEELEVGRNQ ENIINKDRKE
TIEGHKTSIT NQTFSETVEQ DVTVKYNANI EKSVAVEQTL TIYENRQSTI GKNDELTIKG
EQSRITMGAS SSDISADDTL TVGQNLTIEV GNNASIKSDA DHTIISADEI TAQVGSSGFI
LKNNGTITLY GSDITVDGSG SVALVGGNVA INPGAASSQS SSVSANLPRT FSMSPLASTK
PVMNSAAYSE MVEDGALMKE LCQCGKEGIC KLHS
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