| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1355 |
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| Symbol | metC |
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| ID | 6987026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1473236 |
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| End bp | 1474426 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643379713 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_002262812 |
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| Protein GI | 209694884 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.795173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATA AATTAGATAC TAAATATGTT ACGGCGGGTC GCAGTAAAAA ATGGACAAAA
GGCGTGGTTA ATCCCCCCGT TCAACGTGCT TCTACGGTGG TTTTTAACTC TGTGGCAGAA
AAGAATCACG CGATGGTGAA TCGTGCCAAA CAAACTCTTT TTTATGGTCG TCGTGGTACA
GAAACTCACT TTGCCTTGCA AGATGCGATG GTTGAGCTAG AGGGCGGCGC AGGGTGTGCC
TTATACCCTT GTGGGACCGC TGCAATAGCG AATGCGATTT TGTGTTTTGT AAAAACGGGC
GATCACATTT TAATGGTTGA TGGCTGCTAC GAACCAACCC GTGATTACTG TGACACGATG
TTAAAGAAAA TGGGGATTGA AACCACCTAT TACGATCCAA TGATTGGCGA AGGCATTCGT
GATCTAATCA AACCCAATAC CACGGTGCTA TTCACTGAAT CCCCTTGTTC TATCACGATG
GAAGTGCAAG ATGTTCCGCT TCTTGCTCGT ATTGCGCATG AATCCGATAT TGTGGTGATG
CTTGATAATA CATGGGCAGC GGGTGTGAAT TTCTCTCCTT TTGACCATGG TGTTGATATC
TCGATTCAAG CGGCGACCAA ATACATTGTT GGACATTCCG ATGTGATGCT TGGTACGGCG
GTTGCGAATG AAAAACATTG GGACCAACTG CGTGAACAAA GCTATTTAAT GGGCCAATGC
ATCTCTCCTG ATGATGCTTA CCTTGCCATG CGCGGTTTAC GCACCATGGG CGTTCGTCTG
AAGCAACATG AGAAAAGCAG CATTAAAATC GCCAATTGGT TGGCTGAGCA TCCGCTTGTT
GATCACGTTC GTCATCCTGC CCTTGAAAGC TGTCTGGGTA ATGACATTTA CCAACGTGAC
TTTACAGGCT GTAACGGCTT GTTCTCTTTT GTATTAAAGC AATCAGATAC CAAAGCAACA
ACGGCACTGC TTGATAGCAT GACGCATTTT AATATGGGTT ATTCTTGGGG TGGATTTGAA
AGCTTGATCT TAGCGAATGA ACCAAAGAGC TTTAATGCAT TAAGAACAGT GGCTCATCCT
AACTTTGAAG GCACATTGAT ACGTCTTCAT ATTGGACTAG AAGACATTGA TGATTTGATT
GAAGATTTAG AAGAAGGGTT AGCTCTCTAC CAAGAAACCT TGTCAGCTTA A
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| Protein sequence | MSDKLDTKYV TAGRSKKWTK GVVNPPVQRA STVVFNSVAE KNHAMVNRAK QTLFYGRRGT
ETHFALQDAM VELEGGAGCA LYPCGTAAIA NAILCFVKTG DHILMVDGCY EPTRDYCDTM
LKKMGIETTY YDPMIGEGIR DLIKPNTTVL FTESPCSITM EVQDVPLLAR IAHESDIVVM
LDNTWAAGVN FSPFDHGVDI SIQAATKYIV GHSDVMLGTA VANEKHWDQL REQSYLMGQC
ISPDDAYLAM RGLRTMGVRL KQHEKSSIKI ANWLAEHPLV DHVRHPALES CLGNDIYQRD
FTGCNGLFSF VLKQSDTKAT TALLDSMTHF NMGYSWGGFE SLILANEPKS FNALRTVAHP
NFEGTLIRLH IGLEDIDDLI EDLEEGLALY QETLSA
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