| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1344 |
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| Symbol | sdaC |
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| ID | 6989224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1459080 |
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| End bp | 1460330 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379702 |
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| Product | serine transporter |
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| Protein accession | YP_002262801 |
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| Protein GI | 209694873 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACAA CAACGACTGC ATCGACAGGT GCAAAAAAAG CAAAGTGGAC TTATAAAGAC
TTCACTTGGT GTCTTTCTCT ATTCGGTACA GCCGTAGGTG CTGGTGTTTT ATTCCTTCCA
ATTAAAGCGG GTGCGGGTGG TTTTTGGCCT CTTGTTATTC TTGCTCTAAT CGCTGCACCA
ATGACTTGGT TTGCACACAA AAGTTTGGCT CGTTTTGTTC TTTCTGCTAA GAACCCAGAC
GCTGATATTA CCGATACGGT AGAAGAGCAT TTTGGTAAAA CTGGCGCAAA CCTAATCACT
TTTGCTTACT TTTTTGCGAT TTACCCAATT GTATTAATTT ACGGTGTTGG TATTACCAAT
ACAGTCGACT CTTTCATGGT TAACCAAATG GGGATGGAAT CCATTCCTCG TTGGTTATTA
TCAGGTGTTC TTATCACTCT GATGACATGT GGCGTTGTAT TTGGTAAAGA ACTTATGCTG
AAAGCAACAT CAGCAATGGT TTACCCTCTT GTTTTCATTT TGATGGTTCT TTCTGTATAC
CTAATCCCTG AGTGGAACAC ATCAATGGCG TCTGTAGCAC CAGATTGGAG CGCAATGCCT
TCTGTTGTTT GGTTAGCGAT TCCAATCATC GTTTTCTCTT TTAACCACAG CCCAGTGATC
AGCCAGTTCT CTAAAGAACA ACGTCGTGTT TACGGTGAAA ATGCAGTAGC AAAAACTGAC
ATGATCACTG GCGGTGCAGC AATGATGCTA ATGAGCTTTG TTATGTTCTT CGTTTTCTCT
GTGGTTCTTT CTTTATCTCC AGAGCAACTA GCACAAGCAC AAGCACAGAA CATCTCTGTT
CTTTCTTACC TAGCTAACGT TCACGAATCT CCAATGATTT CTATCATGGG TCCTGTTGTT
GCATTTGCAG CGATTACTTC AAGCTACTTC GGTCACTTCC TTGGCGCTCA TGAAGGTCTT
GTTGGTTTAA CTAAGTCTCA CACAAAAGCA CCTCTTGCTA CTGTTGAGAA AGGGTCTCTA
ATCTTCATCG TTGTGACTAC TTGGATCGTT TCTATCGTTA ACCCAAGCAT CTTGGGTATG
ATTGAAACAA TGGGTGCACC AATGATTGCC GCTATCCTAT TCCTAATGCC TGTATTCGCA
ATGCGTAAAG TACCAGCAAT GGCGAAGTAC AAAACTTCAG CACCTGTACA AATCTTCACA
GCATTATGTG GTGTTGCTGC GATTACTTCT GTAATCTACG GCGCTCTTTA A
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| Protein sequence | MQTTTTASTG AKKAKWTYKD FTWCLSLFGT AVGAGVLFLP IKAGAGGFWP LVILALIAAP
MTWFAHKSLA RFVLSAKNPD ADITDTVEEH FGKTGANLIT FAYFFAIYPI VLIYGVGITN
TVDSFMVNQM GMESIPRWLL SGVLITLMTC GVVFGKELML KATSAMVYPL VFILMVLSVY
LIPEWNTSMA SVAPDWSAMP SVVWLAIPII VFSFNHSPVI SQFSKEQRRV YGENAVAKTD
MITGGAAMML MSFVMFFVFS VVLSLSPEQL AQAQAQNISV LSYLANVHES PMISIMGPVV
AFAAITSSYF GHFLGAHEGL VGLTKSHTKA PLATVEKGSL IFIVVTTWIV SIVNPSILGM
IETMGAPMIA AILFLMPVFA MRKVPAMAKY KTSAPVQIFT ALCGVAAITS VIYGAL
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