Gene VSAL_I1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1330 
Symbol 
ID6988271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1442862 
End bp1443224 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content39% 
IMG OID643379690 
Product6-pyruvoyl tetrahydrobiopterin synthase 
Protein accessionYP_002262789 
Protein GI209694861 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACTG AACTATATAA AGACTTCATG TTTGAAGCAG CACACCATTT ACCACATGTA 
CCAGAAGGTC ATAAATGTGG TCGCCTTCAT GGTCACTCTT TTTTAGTTCG CTTGTACGTT
GAAGGTGAAG TTGATCAACA CACCGGTTGG GTAATCGACT TTTCAGAAAT CAAAGCGGCA
TTTAAACCAA CGTATGATCG TCTTGATCAC TACTATCTAA ACGATATTAA AGGGTTAGAA
AACCCAACAA GTGAAGTCTT GGCAAAATGG ATTTGGAACG AAGTAAAACC AAGCTTGCCT
TTATTAAGCA AAATTGAGAT TAAAGAAACC TGTACGGCGG GTTGTACTTA CCGCGGTCAG
TAA
 
Protein sequence
MTTELYKDFM FEAAHHLPHV PEGHKCGRLH GHSFLVRLYV EGEVDQHTGW VIDFSEIKAA 
FKPTYDRLDH YYLNDIKGLE NPTSEVLAKW IWNEVKPSLP LLSKIEIKET CTAGCTYRGQ