| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1312 |
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| Symbol | |
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| ID | 6988886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1423587 |
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| End bp | 1424891 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379675 |
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| Product | putative helicase (DEAD/DEAH box helicase) |
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| Protein accession | YP_002262774 |
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| Protein GI | 209694846 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.539045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTTT CATCTCAAGG TCTTGCACCT GAAGTCGTAA AAGCATTAAC TGAATGTGGT
TATCAAAAAT TAACCCCAAT TCAGCAGAAA GCTATTCCTT TGGCGCGTAA AGGTCATGAT
ATTCTGGCTA ATGCACAAAC GGGTACAGGT AAAACTGCTG CGTTTGCATT GCCTGTAATT
CAACGATTAT TAGATACCAA AAAATCGGCG ACTCGTCGTT CAGCTCGTGC GTTAATTCTG
GCTCCAACTC GTGAGCTTGC AGAGCAAATT GCAGTAAATA TTATTAGCTA CACGAAATAC
ACGTCATTAA AAGTGACGGC TGTATTTGGT GGCAAAAAGA TGTCTTCTCA AGAACGAGCG
CTTGATCCAG GTGTTGATAT CTTAGTAGCG ACACCTGGTC GTCTTCAAGA ACATATAGAA
GAAGGCAATG TATCAATCGC TAACCTTGAA TTTTTAGTAT TCGATGAAGC TGACCGTATG
TTAGACATGG GCTTTGTTAA CGCAATCCGT AATATCATGA TGGAAGTTAA TTCAGCGCCG
CAAATTATGT TGTTCTCTGC GACGTCTTCA GCGCAAATGA ATAAGTTAGC GAGTGATATT
TTACGTAAAC CAAAACGTAT TTCAGTTGAC CGTGAAAACA TGACGGCAAC AACAATATCA
CACGTTGTTT ATCCGGTAGA TGAAGAACGT AAAACTGAAT TACTATCAGA ATTAATTGGT
CGTAAAAACT GGCAACAAGT ATTGGTTTTT GTTAACTATA AAGAAACCGC AAACAACATC
GTTAAAGAGC TTAAGCTTGA TGGTATTAAA GCGGTGATTT GTCATGGTGA TAAAGCACAA
AGTGCTCGTC GTCGTGCTCT AGAAGAGTTT AAAGAAGGCA AAGCTCGTGT CATGGTTGCA
ACGGATGTTG CTGCTCGTGG TCTTGATATT GCTGACTTAC CACACGTAAT TAACTACGAT
ATGCCTTTCT TGGCTGAAGA TTACGTTCAC CGTATTGGTC GTACAGGCCG TGCTGGTAAA
AAAGGTCATG CGATTTCTTT TGTTAGCCGT GAAGAAGAGT TAACGGTTGT TCAAGTGGAA
ACACTTATCC AACAACGAAT TCACCGTGTT GAGCAACCTG GCTATGAACC AAAAAGCCGT
GAATCTTACA TTGAAAAAGT GAATACGAAA GCAGGATTTA AAGATCGTAA AGGTCGTACA
AATAATGCGA CTAATGCGAA CCAAGATCAG TCATCTGCTG AACGTCGTAT GCGTCTAAAA
AATGCAATCC AGAAGAAAGC TGGCATTACT AAGCTAAAAA AGTAA
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| Protein sequence | MSFSSQGLAP EVVKALTECG YQKLTPIQQK AIPLARKGHD ILANAQTGTG KTAAFALPVI
QRLLDTKKSA TRRSARALIL APTRELAEQI AVNIISYTKY TSLKVTAVFG GKKMSSQERA
LDPGVDILVA TPGRLQEHIE EGNVSIANLE FLVFDEADRM LDMGFVNAIR NIMMEVNSAP
QIMLFSATSS AQMNKLASDI LRKPKRISVD RENMTATTIS HVVYPVDEER KTELLSELIG
RKNWQQVLVF VNYKETANNI VKELKLDGIK AVICHGDKAQ SARRRALEEF KEGKARVMVA
TDVAARGLDI ADLPHVINYD MPFLAEDYVH RIGRTGRAGK KGHAISFVSR EEELTVVQVE
TLIQQRIHRV EQPGYEPKSR ESYIEKVNTK AGFKDRKGRT NNATNANQDQ SSAERRMRLK
NAIQKKAGIT KLKK
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