| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1264 |
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| Symbol | |
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| ID | 6986946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1372689 |
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| End bp | 1373696 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379633 |
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| Product | HTH-type transcriptional regulator, LysR-family |
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| Protein accession | YP_002262732 |
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| Protein GI | 209694804 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATACGT CACGATTAAA AGACCATGTT ATTAGATTGT ATTTCGTTGA AATACCCGAT
AATCTGACTT TCACTGTTTC ATTTTTCGAG CATATGGATT TTAGGTGCAA AGTGATGGAT
AGACTGACCG CGTTACATGT TTTTGTCACA ATCGTTGAAC AGAAAAGTTT GAGTGCAGCA
GCTGATCATC TCGACATGTC ACGAGCAAAA GTGTCTCGTT ATTTGGCTGA GTTAGAAAGT
TGGATGGACG TTAGATTACT GCATAGAACC ACAAGAAGCC TCAGTCTAAC CACGCCTGGG
GAAGAAACGC TTGATGCCGC ACGAAACCTA TTAGCGTTAG CGGGTACTTT GGATGGCATT
CGAAATCAAA ATACAGTAAA ACTGAAAGGA CAACTACGAA TAACGGCAAG CTATTCATTA
ATAGACAGTT GTTTAATTGA TGTGATTGAT GAATTTGTGA CGATGTGGCC AGAAACCTCG
ATAGATATCC TTTCTACTGA CGAATCGGTA AATATTATTG AATCTCGTAT TGATCTGGCT
ATTCGCATTA CGAATGACGT TGAACCAAAT ATTGTGGCTA AGCGTCTAGG CGAATGCCGC
TCTATTATTT GTGCTTCACC CTCCTATCTA GCCAAAAATG GCACGCCTCA AAATGTACAA
GCACTCAGTC AACATAACTG CCTTTCTTAC ACTTATTTTG GCCGTTCTGC ATGGGTGTTT
GATGGTCCTA ATGGGCCAGA GTCTGTTCCA ATTACGGGGA ATATTAGTGC AAACCTGTCA
GAAGTATTAC TTGCCGCGAC ATTACGAGGA AATGGCATTA GCCAACAACC CCTTCCTACC
GTTCAACCCT TGATTAATCG TGGTGACTTA GTGGCATTAC TGCCTGAATG GCAGCCAAAA
ATCTTAAACG TTTATGCGAT TTACGCGACA CGAAAACAAG TAACACCTTT ACAGAGAGCC
TTCATTGATT TTCTAACCAA AAGAATGAAA ACGTCACGGT ATTGGTAA
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| Protein sequence | MNTSRLKDHV IRLYFVEIPD NLTFTVSFFE HMDFRCKVMD RLTALHVFVT IVEQKSLSAA
ADHLDMSRAK VSRYLAELES WMDVRLLHRT TRSLSLTTPG EETLDAARNL LALAGTLDGI
RNQNTVKLKG QLRITASYSL IDSCLIDVID EFVTMWPETS IDILSTDESV NIIESRIDLA
IRITNDVEPN IVAKRLGECR SIICASPSYL AKNGTPQNVQ ALSQHNCLSY TYFGRSAWVF
DGPNGPESVP ITGNISANLS EVLLAATLRG NGISQQPLPT VQPLINRGDL VALLPEWQPK
ILNVYAIYAT RKQVTPLQRA FIDFLTKRMK TSRYW
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