Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1262 |
Symbol | |
ID | 6986944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1371318 |
End bp | 1371857 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643379631 |
Product | hypothetical protein |
Protein accession | YP_002262730 |
Protein GI | 209694802 |
COG category | [S] Function unknown |
COG ID | [COG4681] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCTATCA AACCAACCAT CTACAAATTT CGTATCGCGT TAACAGACTT GAATCGTGAT CATTATGATT CAGTAAGCTT AACCATTGCT CAGCACCCAT CAGAAAGTGA AGAGCGTATG ATGGCTCGTG TATTGGCATT TTGTTTGAAT GCTGAAGAGC GTTTAACGTT TACGAAAGGA TTGTCTGCGA TTGATGAGCC GGATATTTGG GTTCGTGAAT ACGATGATAC GATCTCTCTT TGGATTGATG CAGGTGAGCC TGATCCTGAG CGTATGAAAA AAGCGTCACG CCAGTCTAAA GTGACTAAGG TGTACAGCTT TAACTCAAAA TCTGAAGTGT GGTGGAAGCA AAACCAAAGT AAATTCAAAC AGTATCCTGT TGATGTGGTT CGTTTTGATT CTGTTCAAAT ACACTCATTT TCTGCATTGT TAGAAAGAAC GATGGAAATG TCAGTGATGA TCACAGGCGA TTCAGCGTTT ATTTCAGCTG CGAAAGGTGA CTGCGAAGTG ACATGGGAAA CCTTGCAATC GGTTGAATAA
|
Protein sequence | MAIKPTIYKF RIALTDLNRD HYDSVSLTIA QHPSESEERM MARVLAFCLN AEERLTFTKG LSAIDEPDIW VREYDDTISL WIDAGEPDPE RMKKASRQSK VTKVYSFNSK SEVWWKQNQS KFKQYPVDVV RFDSVQIHSF SALLERTMEM SVMITGDSAF ISAAKGDCEV TWETLQSVE
|
| |