| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1255 |
|---|
| Symbol | dnaJ |
|---|
| ID | 6986938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 1364764 |
|---|
| End bp | 1365657 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643379626 |
|---|
| Product | chaperone protein DnaJ |
|---|
| Protein accession | YP_002262725 |
|---|
| Protein GI | 209694797 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.559961 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAC GTGATTATTA TGAAGTCCTT GGTGTCTCTA AAAGCAGCAC AGAAAAAGAG
ATTAAAAAAG CGTACAAACG TCTTGCGATG AAATACCACC CAGATAAGAA TCAGGGTGAT
CCACAAGCCG CAGACAAGTT CAAAGAAATC AAAGAAGCGT ATGAAATTTT AACGGATGCC
GATAAACGCG GGCAATACGA TGATTATGGT CACGCTGCAT TCCAAAATGG TGGCTCAGGT
GGCGGTGGCT TTGGTGGTCA GAGCCAAGGC TACGGCGGAT TTGAAGATAT TTTTGGTGGT
GCATTTGGCG GCGGCGGGCG CAGTCGTGGT GGGTTTGAAG ACATGTTCTC TCAACAACGT
CGTCCTCGTC CACAAAAAGG CCAAGATCGT CAGTTTAACT TAACAGTTGA ATTTGCGGAT
GCCATTAATG GGTGTGAGCA AGTCATCGAA TTACCAATTA ATGGCGAGAA TAAAAAAATC
AACGTCAAAG TACCTGCGGG TATTGATGAT GGTGAGAAAA TTCGCTTTTC TGGTAAAGGC
GAATCTGGAG CCAATGGTGG TCCGGCTGGG GATTTATTAA TTCAAATTAA TACTCGTCCT
CATGAGATTT TAAAACGTGA TGGTAACGAT TTAATTTGCC CTGTTACAAT GGATTTTGCA
ACCGCAGCCC TTGGTGGTGA AGTTGAGATC CAAACGTTAG AAAGCCGCTT TAAATTGAAA
GTGCCAGCAG GTACTCAAAG TGGTCGTAAA TTCCGAATGA AAGATAAAGG CGTGAAAGGC
CGTAAAGGAA TTACAGGGGA TCTAATGGTA GAAATTATCG TAGCGACTCC GACAAATCTA
ACGGATAAGC AAAAAGAATT ATTGATGGCG TTTAGAGATC TAGCGACGGC ATAA
|
|---|
| Protein sequence | MSKRDYYEVL GVSKSSTEKE IKKAYKRLAM KYHPDKNQGD PQAADKFKEI KEAYEILTDA
DKRGQYDDYG HAAFQNGGSG GGGFGGQSQG YGGFEDIFGG AFGGGGRSRG GFEDMFSQQR
RPRPQKGQDR QFNLTVEFAD AINGCEQVIE LPINGENKKI NVKVPAGIDD GEKIRFSGKG
ESGANGGPAG DLLIQINTRP HEILKRDGND LICPVTMDFA TAALGGEVEI QTLESRFKLK
VPAGTQSGRK FRMKDKGVKG RKGITGDLMV EIIVATPTNL TDKQKELLMA FRDLATA
|
|---|
| |