| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1245 |
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| Symbol | ampC |
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| ID | 6989000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1354293 |
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| End bp | 1355156 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379616 |
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| Product | beta-lactamase |
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| Protein accession | YP_002262715 |
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| Protein GI | 209694787 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2367] Beta-lactamase class A |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACGTA AGACGGTTTT GACCCCATTT TTTATCTTAT TTATGCTATT CGCCAACACC
TCAATGGCGG CATCACTTAA TGACACTATG ATCGATCTTG AAAAACAAAC ATCCGGTGAC
ATTGGTGTGG CCGTTTTAGA TACCAAAACA AACCAAATAT GGAGCTATAA AGGCAATCAA
CGATTTCCAA TGATGAGCAC CTTTAAAACA CTTGCTTGTG CGAAGATGCT GCATGACGCA
GACAAAAAAA TCATTAATAA AAAAACTGAA ACAGCCATCG CACAAAAGGA TTTAATCCCT
TGGTCTCCAA TAACAGAAAA GTACGTAGGT AAAAGCATTT CTACAGAAAA AGCCTGTGAA
GCCACAATGC TCATGAGTGA TAACACCGCC GCCAATATCG TATTACAGCA AATAGGCAGC
CCAAGTTCGC TAACTGCTTT TCTTCGATTA ATGGGTGATA GCACGACACA ACTGGATCGC
ATTGAACCTA CATTGAATGA GGCAAAAAAA GGCGATATCA GAGACACAAC AACACCTATT
GCAATGGTTC ATACCATTAA CAAACTTCTG TTAGGTAATA CACTGACCAC TACCGATAAA
GTGACACTGA AAAAGTGGAT GATGGATAAC AAGGTGTCTG ATCCCCTATT ACGATCTATT
TTACCAATAC ATTGGTCTAT TGCTGATCGC TCAGGGGCTG GAGGTTATGG GTCTCGTGGG
ATCACCGCAA TTATTTGGAA TGAACATCGC TTACCGTTGA TCATCAGTAT TTATCTAACT
CAAACGGACC TTACATTGGC AGAGCGTAAT GACATTATCG TTCACGTTGG CTCCGCATTA
TTTACACAAT TCAACGTAAA ATAG
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| Protein sequence | MIRKTVLTPF FILFMLFANT SMAASLNDTM IDLEKQTSGD IGVAVLDTKT NQIWSYKGNQ
RFPMMSTFKT LACAKMLHDA DKKIINKKTE TAIAQKDLIP WSPITEKYVG KSISTEKACE
ATMLMSDNTA ANIVLQQIGS PSSLTAFLRL MGDSTTQLDR IEPTLNEAKK GDIRDTTTPI
AMVHTINKLL LGNTLTTTDK VTLKKWMMDN KVSDPLLRSI LPIHWSIADR SGAGGYGSRG
ITAIIWNEHR LPLIISIYLT QTDLTLAERN DIIVHVGSAL FTQFNVK
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