Gene VSAL_I1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1242 
Symbol 
ID6986927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand- 
Start bp1351891 
End bp1352463 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content38% 
IMG OID643379613 
Producttranscriptional regulator, TetR-family 
Protein accessionYP_002262712 
Protein GI209694784 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGACA TGCGACAATC TATGCTCGAT GCAGGATTCA AACTAATTAA TGAACATGGT 
TTTGCTGGCG TAGGCTTGAT GAAAATCATC AATGAAGCCC AAGGAACGAA AGGTTCTTTT 
TATCATTACT TCAAATCTAA AGAACATTTT GGAGAGACTT TACTTAGTGA TTATTTTGAA 
GAACACTTAG CGATCTTAGA AACATTTCTA AGTGATGATT CAATGACTCG CAATGAGCGT 
GTAAAAGCAT ACTTCCAGTA CTGGGCAACC TCTAAATTGA CTGATGATTT CCATATTAAA 
TGCCTCGTGG TAAAACTGGC AGGTGAAATC TCTGGAGCGT CTGGTAAGAT GCAGATGGTT 
ATGGCTGAAG GTGCAGAAAA AGTGATTCAG CGTATGGCTC AGTTCTTTGA ACAAGGTAAT 
ACTGAGAACG ATTTTACTAT CCAAAATCCA GAAGACACCT CTCGTATGAT ATATAGCTTA 
TGGCTTGGTA GCACACTGTT AGCAGCAATG CAGAAACGCA GAGAGATCCT TAATAACGCA 
ATGAAAGACA CGCTAATCAT TCTTAAATGT TAA
 
Protein sequence
MKDMRQSMLD AGFKLINEHG FAGVGLMKII NEAQGTKGSF YHYFKSKEHF GETLLSDYFE 
EHLAILETFL SDDSMTRNER VKAYFQYWAT SKLTDDFHIK CLVVKLAGEI SGASGKMQMV 
MAEGAEKVIQ RMAQFFEQGN TENDFTIQNP EDTSRMIYSL WLGSTLLAAM QKRREILNNA 
MKDTLIILKC