Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1216 |
Symbol | |
ID | 6986904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1324485 |
End bp | 1324712 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643379590 |
Product | putative HTH-type transcriptional regulator |
Protein accession | YP_002262689 |
Protein GI | 209694761 |
COG category | [K] Transcription |
COG ID | [COG3655] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.893532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATTC GTATAAATTT AGATGTCATG ATGGCGAAGC GAAAAATGCG CCTAAAGCAC TTGGCCCAAG AAGTTGGGAT CACAGAAGCA AATTTGTCTA TCTTAAAAAA TGGGAAAGCA AAGGCTGTTC GTTTAGCGAC ATTGGATAAA CTGTGTGAAA TTCTTGAATG TCAGCCAGGC GATATATTGG AATATGTGGT GGACTTGGAT AGTAAAACAA CCGATTAA
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Protein sequence | MTIRINLDVM MAKRKMRLKH LAQEVGITEA NLSILKNGKA KAVRLATLDK LCEILECQPG DILEYVVDLD SKTTD
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