Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1211 |
Symbol | |
ID | 6986899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1319907 |
End bp | 1321394 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643379585 |
Product | putative extracellular solute-binding protein |
Protein accession | YP_002262684 |
Protein GI | 209694756 |
COG category | [R] General function prediction only |
COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAATA TAAAAAGAAA ACTAGAGGTT TATGAAATAC TTTTTCGTAA GTATGGACCA GTAGCATCAA GCTGTAATAT TACAGAGCTT TCATTATTAT TGAAGGTGAG TGAACGTCAT GTTCAAACTG TAATTAAGAG ATTAGTCAAT ACGGGTTGGA TTGAATGGAA AGCAACGCCG GGTCGCAGTA AAAAAGCACA ATTAACGTGT TATAAAGAAC CGATTGAAGC GTGTTATGAC TGCGTGTCTA CTGTAGTCGA TTCTGGTAAT ACTGACTCTG TTTTGAATAT ACTCAGTTTT GGTGGACGTA ATGCTTCTAT TGAGCTTAAA AAGTATCTTC TCCATTCCAA TAACATCGTA CCACGCTCGG TTTGTATGCC TTTTCATCGG AAGATTGGCT CCTTATTACC TCATAACGCA ATCTGTCGTA CCGAGCGTTA TTTAGTGAGT CAAATTTTTC AGCGTTTAGT GAGTATTGAT AACGATATTA TTCACCCTGA TTTTGCACAT CATTGGGAGC ATGATTCTTC TGCAACACAG TGGCGTTTTT ATCTTCGAAG TGGCGTTGTC TGTCATGACG GAAATCCGTT AACGGCAAAA GATGTTGTAC GTTGTTTAAA AACACTGATA GCCAACTATT ATTGGAGTCC ACTTTATTCT AACCTCAAAG GGATTAGGTT TCTTTCTGAA GAGTGTATTG AAATCACCTT ATCAGAAGGC GACTTTCATT TGCCAAGATT ATTGGCTCGG AGTGAAGCCT CTATTTATCC TATTCATGTA TCGACAGATA AGATCGTTGG TTCTGGTCCA TTTCAGGTTG AAGTGTGGTC ACCAAGAATG ATCCGATTAG GCCGATTTGA GCACTATGCC TTAGTGTTCC CGTTGTTGGA AAGAGTGGAT TTGTGGGTGT ATGAAGAATG GGCAAAAGAT AAAGTTTGCG CTCAAAACCA GCTAAGTTTG TCATTTCCAG AAAAGAAAGT TACGTATAAA AGTAAATATC ATTCTTTGTT TATGATAATA AAAAAACAAG GCAGTAACTT GGATTGCTCT AATATAGTGA CTTATGAAAA CAACAATGAA TGCAAAGCTT TAGCCCAAAA ATTATATTCA TCTCAGACAC TACAAGACGT TTTTTATGGC GACTACCATC ATCAAGCGGA TACTGCACTG TGTAGCATTC TTGAAGAAAG TGATCGGTTA TACAGTCGTC TGGCTTTTTT ATCTCTTTAT CCGTTTAAAA ACAAAATCGT TAAAGACGTT GATTATGATT TATTTCTAAA TAAGGTATCT GACATAAGAA ATACTCCCGA TTTAGCGTTA GCGGTTGAAG AGTTGGAGCA ACTGTATGAT TGGTTACAAC AGATAGGCGT TATTGATATC GTTAAGAAAG ATTCGTTTGA ACTCATCACC TCTGAAAATC TAAAAGAGGT AAGAATGAAC GGTTTTGGTT GGTGTGATTT AGCTAAATTG TGGATAGCTA ATCATTAA
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Protein sequence | MENIKRKLEV YEILFRKYGP VASSCNITEL SLLLKVSERH VQTVIKRLVN TGWIEWKATP GRSKKAQLTC YKEPIEACYD CVSTVVDSGN TDSVLNILSF GGRNASIELK KYLLHSNNIV PRSVCMPFHR KIGSLLPHNA ICRTERYLVS QIFQRLVSID NDIIHPDFAH HWEHDSSATQ WRFYLRSGVV CHDGNPLTAK DVVRCLKTLI ANYYWSPLYS NLKGIRFLSE ECIEITLSEG DFHLPRLLAR SEASIYPIHV STDKIVGSGP FQVEVWSPRM IRLGRFEHYA LVFPLLERVD LWVYEEWAKD KVCAQNQLSL SFPEKKVTYK SKYHSLFMII KKQGSNLDCS NIVTYENNNE CKALAQKLYS SQTLQDVFYG DYHHQADTAL CSILEESDRL YSRLAFLSLY PFKNKIVKDV DYDLFLNKVS DIRNTPDLAL AVEELEQLYD WLQQIGVIDI VKKDSFELIT SENLKEVRMN GFGWCDLAKL WIANH
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