Gene VSAL_I1211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1211 
Symbol 
ID6986899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1319907 
End bp1321394 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content37% 
IMG OID643379585 
Productputative extracellular solute-binding protein 
Protein accessionYP_002262684 
Protein GI209694756 
COG category[R] General function prediction only 
COG ID[COG4533] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAATA TAAAAAGAAA ACTAGAGGTT TATGAAATAC TTTTTCGTAA GTATGGACCA 
GTAGCATCAA GCTGTAATAT TACAGAGCTT TCATTATTAT TGAAGGTGAG TGAACGTCAT
GTTCAAACTG TAATTAAGAG ATTAGTCAAT ACGGGTTGGA TTGAATGGAA AGCAACGCCG
GGTCGCAGTA AAAAAGCACA ATTAACGTGT TATAAAGAAC CGATTGAAGC GTGTTATGAC
TGCGTGTCTA CTGTAGTCGA TTCTGGTAAT ACTGACTCTG TTTTGAATAT ACTCAGTTTT
GGTGGACGTA ATGCTTCTAT TGAGCTTAAA AAGTATCTTC TCCATTCCAA TAACATCGTA
CCACGCTCGG TTTGTATGCC TTTTCATCGG AAGATTGGCT CCTTATTACC TCATAACGCA
ATCTGTCGTA CCGAGCGTTA TTTAGTGAGT CAAATTTTTC AGCGTTTAGT GAGTATTGAT
AACGATATTA TTCACCCTGA TTTTGCACAT CATTGGGAGC ATGATTCTTC TGCAACACAG
TGGCGTTTTT ATCTTCGAAG TGGCGTTGTC TGTCATGACG GAAATCCGTT AACGGCAAAA
GATGTTGTAC GTTGTTTAAA AACACTGATA GCCAACTATT ATTGGAGTCC ACTTTATTCT
AACCTCAAAG GGATTAGGTT TCTTTCTGAA GAGTGTATTG AAATCACCTT ATCAGAAGGC
GACTTTCATT TGCCAAGATT ATTGGCTCGG AGTGAAGCCT CTATTTATCC TATTCATGTA
TCGACAGATA AGATCGTTGG TTCTGGTCCA TTTCAGGTTG AAGTGTGGTC ACCAAGAATG
ATCCGATTAG GCCGATTTGA GCACTATGCC TTAGTGTTCC CGTTGTTGGA AAGAGTGGAT
TTGTGGGTGT ATGAAGAATG GGCAAAAGAT AAAGTTTGCG CTCAAAACCA GCTAAGTTTG
TCATTTCCAG AAAAGAAAGT TACGTATAAA AGTAAATATC ATTCTTTGTT TATGATAATA
AAAAAACAAG GCAGTAACTT GGATTGCTCT AATATAGTGA CTTATGAAAA CAACAATGAA
TGCAAAGCTT TAGCCCAAAA ATTATATTCA TCTCAGACAC TACAAGACGT TTTTTATGGC
GACTACCATC ATCAAGCGGA TACTGCACTG TGTAGCATTC TTGAAGAAAG TGATCGGTTA
TACAGTCGTC TGGCTTTTTT ATCTCTTTAT CCGTTTAAAA ACAAAATCGT TAAAGACGTT
GATTATGATT TATTTCTAAA TAAGGTATCT GACATAAGAA ATACTCCCGA TTTAGCGTTA
GCGGTTGAAG AGTTGGAGCA ACTGTATGAT TGGTTACAAC AGATAGGCGT TATTGATATC
GTTAAGAAAG ATTCGTTTGA ACTCATCACC TCTGAAAATC TAAAAGAGGT AAGAATGAAC
GGTTTTGGTT GGTGTGATTT AGCTAAATTG TGGATAGCTA ATCATTAA
 
Protein sequence
MENIKRKLEV YEILFRKYGP VASSCNITEL SLLLKVSERH VQTVIKRLVN TGWIEWKATP 
GRSKKAQLTC YKEPIEACYD CVSTVVDSGN TDSVLNILSF GGRNASIELK KYLLHSNNIV
PRSVCMPFHR KIGSLLPHNA ICRTERYLVS QIFQRLVSID NDIIHPDFAH HWEHDSSATQ
WRFYLRSGVV CHDGNPLTAK DVVRCLKTLI ANYYWSPLYS NLKGIRFLSE ECIEITLSEG
DFHLPRLLAR SEASIYPIHV STDKIVGSGP FQVEVWSPRM IRLGRFEHYA LVFPLLERVD
LWVYEEWAKD KVCAQNQLSL SFPEKKVTYK SKYHSLFMII KKQGSNLDCS NIVTYENNNE
CKALAQKLYS SQTLQDVFYG DYHHQADTAL CSILEESDRL YSRLAFLSLY PFKNKIVKDV
DYDLFLNKVS DIRNTPDLAL AVEELEQLYD WLQQIGVIDI VKKDSFELIT SENLKEVRMN
GFGWCDLAKL WIANH