| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1159 |
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| Symbol | rluB |
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| ID | 6988228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1262544 |
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| End bp | 1263608 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379537 |
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| Product | ribosomal large subunit pseudouridine synthase B (rRNA pseudouridylate synthase B) |
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| Protein accession | YP_002262636 |
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| Protein GI | 209694708 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.374483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA AATTACAGAA AGTATTAGCA CGAGCTGGTC TTGGTTCTCG TCGTGAGTTA
GAAACGATGA TTCAAGCTGG TCGAGTTAGT ATTGATGGTC AGAAAGCAAA ATTAGGCGAT
CGCCTAGAAA ACGTTGATGC AAGAATCCGC ATCGATGGCC ATGTAGTATC AGTAAAAGAA
TCTACTGATG TGATCTGTCG AGTGCTTGCT TACCACAAGC CTGAAGGCGA ATTATGTACA
CGTCATGATC CAGAAGGTCG TCGTACTGTT TTTGACCGTT TACCAAAAAT TAAAGATTCT
CGTTGGGTAT CTGTTGGTCG TCTGGATGCC AACACTGCGG GTCTATTGTT GTTTACAACA
GATGGTGAAC TTGCAAACCG TCTAATGCAC CCAAGCCGCA AAGTTGAACG TGAATATATG
TGTCGTATAT TCGGTGACAT TAACGACAAA ATGGTTAAAA ACCTAGTTAC TGGTGTAAAA
CTAGAAGATG GTGAAGCTCG TTTTGAAGAT GTAATGTACG CCGGTGGCGA AGGCATGAAC
CACACTTTCT ATGTTGTGAT TAATGAAGGT CGTAACCGTG AAGTTCGTCG TTTATGGGAT
TCACAAGGCG TAACAGTAAG TCGTCTAAAA CGTGTACGTT ACGGTGATAT TTTCCTAGAG
AAAGCATTAC CACGTGGCGG TTGGATGGAA CTTGAGCTTA AAGAAGTAAA CTACTTGCGT
GATATGGTTG AATTACCACA CGAAAAAGAA AGTTTATTAG ATGTAGATAA AGAATCACGT
AAGCGTGCTA AATCTAAATC TCAAAAGATC CGCCGTGCAG TTAAGCGTCA TGATGAGCGT
ACAACGGAAG ATCGTAATAC CGCTGGTGGT CGTCGTGGTC GTAATAATAA AAAACCAGTC
GGTGGTTCAT TGCCAACAGC GAAGAAACCG ACAAGCATTG AAAGTGCAAA ACCTGCCGGT
AAAGGCAAGC CAAAGGGCAA ACCTTCAGCT AATGGTGCAA AACCGATCAG AACTAAGTTT
TCACCAAATG GTAAAGCACC AAAATCAGCA CCAAGACAGC GTTAA
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| Protein sequence | MSEKLQKVLA RAGLGSRREL ETMIQAGRVS IDGQKAKLGD RLENVDARIR IDGHVVSVKE
STDVICRVLA YHKPEGELCT RHDPEGRRTV FDRLPKIKDS RWVSVGRLDA NTAGLLLFTT
DGELANRLMH PSRKVEREYM CRIFGDINDK MVKNLVTGVK LEDGEARFED VMYAGGEGMN
HTFYVVINEG RNREVRRLWD SQGVTVSRLK RVRYGDIFLE KALPRGGWME LELKEVNYLR
DMVELPHEKE SLLDVDKESR KRAKSKSQKI RRAVKRHDER TTEDRNTAGG RRGRNNKKPV
GGSLPTAKKP TSIESAKPAG KGKPKGKPSA NGAKPIRTKF SPNGKAPKSA PRQR
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