| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1140 |
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| Symbol | hisI |
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| ID | 6988664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1243108 |
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| End bp | 1243728 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379519 |
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| Product | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein |
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| Protein accession | YP_002262618 |
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| Protein GI | 209694690 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0139] Phosphoribosyl-AMP cyclohydrolase
[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
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| TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.275701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAAC AAGATTTTGC AACACGTATT GATTGGGAAA AAGTGGACGG CTTAGTACCT
GCAATTATTC AAGACTTTAG TTCAAGCCAA GTATTGATGA TGGGCTACAT GAACAAAGAC
GCGTTATCAA AAACGTTAGA GACAAAGAAA GTTACTTTTT TCTCTCGCAC TAAGAATCGT
TTATGGACTA AAGGTGAAGA ATCAGGCGAT AGCTTAAATT TGGTTAATAT CTCTTTAGAT
TGTGATAACG ATACATTACT TATCAAAGTT AAACCTGTTG GTCCAACGTG CCACACAGGG
ACAACTACTT GTTGGGATAG CGATAAAACA GAAGAAAGCC AATTAGTTTG GCTTCATCAG
TTGGAACAGC TACTTGCCGA GCGTAAGAAT GCTGATCCTG ACTCCTCTTA CACAGCAAGT
CTCTACGCCC GTGGCACCAA ACGTATTTCG CAGAAAGTTG GCGAAGAGGG CGTTGAAGTT
GCGCTTGCAG CGACGTCGGG TGACAAGGCG GAGCTAGTGT GTGAATCAGC AGATTTGATG
TATCACTTGT TTGTTCTGCT TCAAGACCAA GGCTTGTCGT TTGATGATGT GATTAATAAA
TTGAAAGAAC GTCATACGTA A
|
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| Protein sequence | MSQQDFATRI DWEKVDGLVP AIIQDFSSSQ VLMMGYMNKD ALSKTLETKK VTFFSRTKNR
LWTKGEESGD SLNLVNISLD CDNDTLLIKV KPVGPTCHTG TTTCWDSDKT EESQLVWLHQ
LEQLLAERKN ADPDSSYTAS LYARGTKRIS QKVGEEGVEV ALAATSGDKA ELVCESADLM
YHLFVLLQDQ GLSFDDVINK LKERHT
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