| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1125 |
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| Symbol | vasJ |
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| ID | 6989392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1226761 |
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| End bp | 1228302 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643379505 |
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| Product | putative type VI secretion protein VasJ |
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| Protein accession | YP_002262604 |
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| Protein GI | 209694676 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03362] type VI secretion-associated protein, VC_A0119 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTACGT ATAAAACAAT TCTTTCTGAC TTATCAGGAG AGAATCACTT TGGCATAGAT
TTAAGTTATG AAACTGAATT TGAATCTATT GAAAAAGAAG TCGTAAAATC AACCGACATT
TTTGCAACGA CTAAAACTGA CTGGTCAGAA GTTAGATCTA ACTCTTTGAA TTTACTTCAA
TATAAAAGTA AAGACTATCG TTTACTTCAT TGGTTGCTAT TATCAATAAA AAAAGAAAAT
GACCATAATA CGTTCATTAT TATTCTTCCA ATAATTAATC AATTTTTCAT TAAATATAGC
ACGACTATTT ATCCATTAAG AGAGAAACAG CTTTACTCAA CGATTAATAA AATAATAGTA
ATCATTGATG ATATAGTCAA AAGTATAATT GATAATTCAA TAGATACTAA TGCATCAAAT
AATTTAATCG CATTATTATC AATATTAGAT ATAACGATTG ATGAATCATT TAATGCCAAT
ACCGATAATT TATACTTAAC AATTAATAAA CTAAGTATAA ATATAAAAAG AATATCATCA
GAAAAAAAAG AAGGGAGTAC TTCCTCATCT CCTTTAATTA ATAATGAGGC TATCAAATCA
ATCGCATCCG TTTCTTTTTC TATCGATCCC ATTACCAATG ATCGCGATGC AAATAAAGCA
TTTCGACATT TGCAGGATAT TGCCCGTAAC TTATCAAAAT TTTGGCTTAC TCAACGAATT
AACAACGAAA AAGCCTATCA ACTAAACCGT ACATTAACAT GGCTACACAT CATCCAACTC
CCTGCGAGTA ACGATGAAAA GATAACCATG TTAAAACCGA TCCCACAAAC ACGACTTCAA
TATTTCATCA AATTGAAGAA TGAATCTGAT CACGAAACAT TATTACTTGA AATAGAAGAA
AGCTTGTCAA AGTCGCCTTT TTGGATAGAT GGGCATCTTA TCGCTTGGGA AAGCTTAATC
GCATTAAACC ACCCAGAAGC AGCTCAAATC ATTCTCGAGC AAATGGCATT ATTAATTAAA
AAGATCCCTG AAATTATCAC ATTAAAATTT GATGATGGAA CTGAATTTGC GAGTAATAGT
GCAAAAAACT GGATCGCAGA ACATTGCACC TCAGCAGCAC CATCTCAAAT AGCAGCAAAT
ACTTACAATG AAATAAGTGA TGGCACAGAT TGGGAAGACG CTTTACAAGC TGCACAATCG
GTTCTCACTA CCGACAATTT ATCAGACGCA ATTCTTCCTT TAATTACTGG ACACAACCAA
TGCCGTTCAG ACAGAGAAGT TTTCTTTTGG AAGTTTTCAC AAGCCAAATT GTTATATCAA
GCTCATAAAT TTGACTTAGT TTGTGCCTTA ACAAGTTGGT TAGATTCTCG CTACTCTCAC
TCAATCTTAA TTCATTGGGA TCCAGTACTA GAAGAACGAT TATTAGAATT ATGGCTTTCA
TCTCAAAACA AGCTACCCAA TAAAGAACAA GACACTCATT TAATGAATAC ATTACGAGAA
AGACTCTGTT GCTTAAATCC AATGCGAGTT CTTAATTTTT AA
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| Protein sequence | MCTYKTILSD LSGENHFGID LSYETEFESI EKEVVKSTDI FATTKTDWSE VRSNSLNLLQ
YKSKDYRLLH WLLLSIKKEN DHNTFIIILP IINQFFIKYS TTIYPLREKQ LYSTINKIIV
IIDDIVKSII DNSIDTNASN NLIALLSILD ITIDESFNAN TDNLYLTINK LSINIKRISS
EKKEGSTSSS PLINNEAIKS IASVSFSIDP ITNDRDANKA FRHLQDIARN LSKFWLTQRI
NNEKAYQLNR TLTWLHIIQL PASNDEKITM LKPIPQTRLQ YFIKLKNESD HETLLLEIEE
SLSKSPFWID GHLIAWESLI ALNHPEAAQI ILEQMALLIK KIPEIITLKF DDGTEFASNS
AKNWIAEHCT SAAPSQIAAN TYNEISDGTD WEDALQAAQS VLTTDNLSDA ILPLITGHNQ
CRSDREVFFW KFSQAKLLYQ AHKFDLVCAL TSWLDSRYSH SILIHWDPVL EERLLELWLS
SQNKLPNKEQ DTHLMNTLRE RLCCLNPMRV LNF
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